Agrobacterium vitis VAR03-1: RvVAR031_14920
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Entry
RvVAR031_14920 CDS
T08810
Name
(GenBank) glycosyl transferase family 1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
avf03012
]
RvVAR031_14920
Translation factors [BR:
avf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
RvVAR031_14920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_23
AAA_29
AAA_30
MMR_HSR1
RsgA_GTPase
SbcC_Walker_B
BLOC1_2
Not3
Motif
Other DBs
NCBI-ProteinID:
BCH53882
LinkDB
All DBs
Position
1:complement(1641150..1643033)
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AA seq
627 aa
AA seq
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MITINDVSARIAGRLLIDHASISLPTGTKAGLVGRNGAGKSTLFRVITGDLGAESGSVSI
PKNAKIGQVAQEAPGTEDSLIEIVLAADKERTALMAEAETATDPNRIADIQMRLVDIDAH
SAEARASSILAGLGFDQEAQLRPASAFSGGWRMRVALASVLFAEPDLLLLDEPTNYLDLE
GTLWLEDYIRRYPHTVIIISHDRDLLNNAVNAIVHLDQKKLTFYRGGYDQFERQKAENDE
LQMKSKAKSDAARKHLQSFIDRFKAKASKAKQAQSRVKALERMGTVSAVIEDHVQPITFP
EPEKQPASPIIAINGGSVGYEPGKPILKNLNLRIDADDRIALLGSNGNGKSTFAKFISGR
LPPESGDLRLAPSLKIGFFAQHQLDDLVPGDTPVEHVRRLMPQAPEAKVRARVAQMGLAT
EKMATAAKDLSGGEKARLLMGLAAFHAPNLLILDEPTNHLDIDSRRALIEALNDYDGAVI
LISHDRHLIEATVDRLWLVNNGTVTTFEGDMEEYRDLIVSSGKKKEEKIDLTVEAGKKAD
QRKANAEKRAALAPLKKKINEIESLTKKLEAVIQGLDAELADPVLYEKHPAKAAEKVKQR
GEAAAKLSAAEEQWLELSTEYEEAMAG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgattaccatcaatgacgtctccgcccgtattgcaggccgcctgctgattgaccacgcc
agcatttcgctgccaacaggcacgaaagcgggtcttgtcggccgcaatggtgccggaaaa
tccaccctgttcagggtgatcaccggcgacctgggcgccgaaagtggctcggtctccatt
cccaagaatgccaagatcggtcaggtggcgcaggaagctcccggcaccgaggacagcctg
atcgaaatcgtcctggcggctgacaaggagcgcaccgcgctgatggcggaggccgaaacg
gccaccgacccgaaccggatcgccgacatccagatgcggctggtggatatcgatgcccat
tcggcggaagcccgcgcctccagcatccttgccggtctcggcttcgaccaggaagcacag
ttgcgcccggcctcggccttttcaggcggctggcggatgcgcgtggcgctggcctcggta
ttgtttgccgagccggacctgctgctactggacgagccgaccaactatctcgaccttgaa
ggcacgctgtggctggaagactatatccgccgctacccgcacactgtcatcatcatcagc
catgaccgcgatctgctcaacaacgcggtcaatgccatcgtccatctcgaccagaagaaa
ctgaccttctatcgcggcggctatgaccagttcgagcgccagaaggccgagaacgacgaa
ttgcagatgaagtcgaaggccaagagcgatgcggcgcgcaagcatctgcaaagcttcatt
gaccggttcaaggccaaggcctccaaggccaaacaggcccagagccgcgtgaaagccctg
gagcgcatgggcacggtctcagcggttattgaagaccacgtccagccgatcaccttcccg
gagccggaaaagcagccggcatcgccaatcatcgctatcaatggcggttccgttggttac
gaacccggcaagccgatcctgaaaaacctcaacctgcgcatcgatgcagatgaccgcatc
gcgctgctgggatcaaacggtaacggtaaatccaccttcgccaagttcatttccggtcgc
ctgccgcccgaaagcggcgatctgcggctagccccgagcctgaagatcggctttttcgcc
caacatcagttggatgatctggtgccgggagataccccagtggaacacgtgcgtcggttg
atgccgcaggcaccggaagccaaggtgcgcgctcgcgtcgcccagatggggctggccacc
gaaaagatggcgacagccgccaaggatttgtccggtggagaaaaggcccggttgctgatg
ggccttgctgcctttcacgcccccaatctgctgatccttgatgagccgaccaaccatctg
gatatcgacagccgccgcgccctgatcgaagcgctgaacgattacgacggcgcggtcatc
ctgatctcccatgatcgccacctgatcgaggcgacggtggaccggctctggctggtcaat
aacggcaccgtcaccacattcgaaggggacatggaagaataccgcgacctgattgtctct
tcgggtaaaaaaaaagaagaaaaaattgacttaaccgtcgaggccggaaaaaaagccgac
cagcgcaaggccaatgccgaaaagcgggccgcgctggcgccgctgaagaaaaagatcaac
gaaatcgagtcgctgaccaagaaactggaagcagtgattcaaggccttgatgcagaactt
gcagatccggttctctatgaaaagcatccggccaaggcggcggaaaaggttaagcagcgc
ggcgaggcagccgccaagttgagcgctgccgaagagcaatggctggagctttcaaccgaa
tatgaagaggcgatggcgggctag
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