Agrobacterium vitis VAR03-1: RvVAR031_15660
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Entry
RvVAR031_15660 CDS
T08810
Name
(GenBank) hypothetical protein
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
DUF6531
Motif
Other DBs
NCBI-ProteinID:
BCH53956
LinkDB
All DBs
Position
1:complement(1712854..1717206)
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AA seq
1450 aa
AA seq
DB search
MPDGGETSYVPTTRTYVDKDGVQTNERQIPHTDTSQTNANTTGQLNANASAADVRPIWIA
DLRSKIAANNEKIKDYRRVSQIGGADEEGYWNNEIGKLEQENAAYEDRIEFIDQQFQDAA
DVKQIADEGSKGNYKEASSLAWNKWGAQAILFVFGGLLGKLEGKVASAEAKAASRTAKEE
VVPPAKSEPNIVGEPVSVTNGEYLETWRDFFIPGTLGFDGSRYMGLKLGLPARYTSPLGP
CQISMFDEVFSNPARGKLLFHTADGKAIDFDRPFNFLPSINAAYPNLELKAPWLKQLELK
DRGIVKHFRQYDDDVYRLEKLDDLNGNSLTFQRSDAGWLEQIEGPDGLSLIFNNDAQGQR
TRIALIGTEGSELELARYTYDAKGRMREATCAFGMSVHYVWERDRELLVSWNHLTRQSET
HFTYDDDGRVVHTRTNGIWNNDRFDYREGETDYLPGGVEAEAQTFRYDEHENVTAEIDAL
GGVVAHGYDRHGFRISTKNQNGHESRTRYDVHGNVKELTDPEGRSTVYGWGDNGELLIAI
DGAGNKRTYKHDDNANVISEKDAEGHETRLVRDARGRVVETHFPNGAIERRAWDAHNRLA
SVTDVKGNTSHFVYDAFGRLVETIGPTGAVTKHIYRAGAGGFDTVSAVIRADGVQVTRSF
DGAGQLATVTDGEGRMWHYRYGAFGVLQAIVDPKGGELKLATDIEGRVISVTNAVGRVYS
FERDAAGRVVVEEDFDGRVWHYARDAAGQIIETTKPDGAKLRYAYDKSGLIKRIESFTTK
GEPEDITRFWYDARGLLISAENSAALVEFERDRNGRIIGESLNGKRIKAKRDAMGNRILR
EITGAGGCLAQYIRDPLGAVEQMVAGDTEISFKRDVLGRETERRMGGFHLLQRFDAAGQL
AAQAAGPAVAGGLDVSRLGWNIPGGGGERSARARPGHIHRVYEYDRAFAPTSIDDGLWGK
RQYTYDDNGQLTDSEAAFGSERYQYDEARNLAGASSSVTIAEQPTTYGRAFDDTFGSIVP
APKPTGWQTSAGGVVQIARGPKGEKIQLTHDDCGRLIERRVERDGFRSQRWRYRWDAHDR
LVGVTTLEGEEWLFRYDPFGRRVSKVRRFAEKDRHRAAIRWPGLVGGDGVPRQTKTALDA
ADTDHDLPEVGTAYLWDGDHMVAEAPLSLDGHIAWDQATHWNFEDGSHRLLAKQLPSGEM
LAIVSDHLGTPKEMFDAKGTLIWAADHHVWGAIRTTKTFGSLAALPKHDRPPDELHCPWR
FPGQYEDAETGLCYNRHRHYDPLTGQYASPDPIGLAGGDRPQGYVENPHTAVDVFGLSAS
PFLDPYRGVKDASKYLKDTGVPRQYRKQVLESFDRDAIQVRPAGPSEYGIRYFDRVNAQD
KGRYLFETFPATRETLALDPKWNQMSEFKQWQISPGSMLIEGPAAPQGLGLPGGQIQKYI
PNLNDLLEVK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgatggcggtgaaacaagttatgttccgacgacgcgcacctatgtcgataaagac
ggtgtgcagacgaatgagcgtcagatcccgcataccgacaccagccagacaaacgccaat
accactgggcaattgaatgccaacgcgtcagcggcagatgtgcgtcccatctggatagcc
gatcttcgttccaaaatcgcagcaaacaacgagaaaatcaaagattaccgacgtgtttct
cagatcggcggagctgacgaagagggatattggaataatgagattggcaagctcgaacaa
gaaaatgccgcgtatgaagaccggattgaattcattgaccagcaatttcaggatgcagcg
gatgtaaagcaaatagcggatgaagggtcaaaaggaaattacaaggaagcctccagtctc
gcgtggaataaatggggcgcacaggcgatcctgtttgtttttggaggtctattagggaag
cttgaaggcaaggtcgcttctgcagaagcgaaagcggcgagccgcactgcaaaagaggaa
gtggtcccgccagcgaaatcggagccaaacattgtcggcgaacccgtctccgttaccaat
ggcgaatatctcgaaacctggcgcgattttttcatccccggcacgcttggctttgacggt
tcccgctatatgggcctcaagctcggcctgcccgcgcgctacaccagcccgctgggaccg
tgccagatctcgatgttcgacgaggtgttttccaacccggcgcgtggcaagctgctgttt
cacactgccgatggcaaagcgattgattttgaccgacccttcaatttcctcccgtcgatc
aatgccgcctaccccaatctggaactgaaggctccctggctgaagcagctggagctcaag
gatcgcggcatcgtcaagcacttcagacagtatgacgacgatgtctaccggctggaaaag
ctcgatgacctgaacggcaacagtctcaccttccagcgctcggatgctggctggctggaa
cagatcgaggggccggatggcctttcgctgattttcaacaatgacgcgcaaggccagcgc
acccgcatcgcgctgatcggcactgaaggttccgagctggaactggcgcgctacacctat
gatgccaagggacggatgcgggaagccacctgcgcctttggcatgtcggtgcattacgtc
tgggaaagagaccgggagcttcttgtctcgtggaatcacctgacacgccagtccgaaacc
cattttacctatgacgacgatggccgggtggtgcacacccgcaccaacggcatctggaac
aatgaccggtttgattaccgcgaaggcgagaccgattatctccccggtggtgtggaggcg
gaagcccagaccttccgctacgacgagcatgaaaacgtcactgcggaaatcgatgcgctg
ggcggcgtggtggcgcatggctatgatcgccacggctttcggatttcgaccaagaaccag
aacggccatgaaagccgcacgcgctatgatgtccatggcaatgtcaaggaactgaccgac
ccggaaggccgctcgacggtctatggctggggtgacaatggcgaactgctgatcgccatc
gatggtgccggaaacaaacggacctacaagcatgatgacaacgccaatgtcatcagcgag
aaggatgccgaaggccatgagacccgattagtgcgcgatgccaggggccgggtggtggaa
acccatttccccaatggtgcgatcgagcggcgggcatgggatgcacataaccggctggcc
tcggttaccgatgtcaaaggcaataccagccactttgtctacgatgcctttggccgtctg
gtggaaaccatcggcccaacgggtgctgtcaccaaacacatctaccgggccggtgcgggt
ggctttgataccgtcagcgccgttatccgtgctgatggtgtgcaggtcacgcgctcgttt
gatggtgcaggccagcttgccacggtcacggatggcgaggggcgcatgtggcactatcgc
tacggtgccttcggtgtgttgcaagccatcgtcgatcccaagggtggggagctgaaactt
gccaccgatatcgaaggccgggtcatctccgtcaccaatgccgttggccgtgtctatagc
tttgagcgggatgcagccggacgggtcgtggtcgaagaggatttcgatggccgggtctgg
cactacgcccgcgatgccgcaggccagatcatcgagaccaccaagccggatggcgcaaag
ctgcgctacgcctatgacaaatccggcctgatcaaacggatcgaaagttttaccaccaaa
ggcgagccagaggatatcacgcgcttctggtacgatgcccgcggcctgctgatcagtgcc
gaaaacagtgccgcacttgtggaattcgagcgagaccgcaatggccgcatcatcggcgaa
agcctgaatggcaagcgcatcaaagccaaacgcgatgcgatgggcaaccgcattctgcgc
gagatcaccggcgcaggcggctgtcttgcgcagtatatccgcgatcccctaggcgccgtt
gagcagatggtggcaggtgataccgagatcagcttcaaacgcgatgtcctgggccgcgag
accgaacgccgcatgggtggtttccacctgctgcaacgctttgatgccgcaggccagctt
gccgcccaggcagccggtcctgcggtggcaggtggcctggatgtgtcgcgattgggctgg
aatatccctggcggcggcggtgaacgctcggcacgcgcccgacccggacatatccaccgc
gtctacgaatatgaccgggcctttgcccccaccagcattgatgatggtctgtggggcaaa
cgacaatacacctatgatgacaacggccaactgacggattctgaagccgcctttggctcg
gaacgctatcaatatgacgaagcgcgcaatctggctggtgcctcgtcatctgtcacgatt
gccgaacaacccaccacctatggccgggcctttgacgacaccttcggctctatcgtcccc
gctcccaaaccgaccggttggcaaacatctgccggtggcgtggtgcagattgcgcgtggc
cccaagggcgaaaagatccagctcacccatgacgattgcggacggctgatcgaacggcgg
gtcgagcgcgacggtttccggtcgcagcgctggcgctatcgctgggatgcccatgatcgg
ctcgtgggcgttaccaccctggaaggcgaggaatggctgttccgctacgatccctttggc
cgtcgcgtgtccaaggtccgccgctttgccgagaaagaccgccacagagccgccatccgc
tggccagggcttgtgggtggcgatggcgtgccacggcagacgaagacagctttagatgcc
gccgatacggatcacgacctgccggaggtgggaaccgcctatctgtgggacggcgaccac
atggtggcggaagcgccgctgtctctggatggccacatcgcatgggatcaagccacccac
tggaattttgaagacggcagccataggcttctggccaagcaactcccctctggagagatg
ctggccatcgtcagcgaccacctcggcacacccaaggagatgtttgacgccaagggcacg
ctgatctgggccgccgatcaccacgtctggggtgcaatccgtaccaccaaaaccttcggc
tccctcgccgccctccccaaacacgaccgcccaccggatgaactccactgcccctggcgg
tttccggggcagtacgaggatgccgagaccggcctctgctacaaccgccatcggcattac
gatccgctgacggggcaatatgccagcccggacccgattgggttggcaggtggtgatcgg
ccgcaggggtatgtggagaatccacatacagcggtggatgtgttcgggttaagtgcttcg
ccttttcttgatccgtataggggagtgaaagacgcctctaaatatttgaaagatacgggt
gtcccaaggcaatatagaaagcaggtcctagaatcatttgatagagatgcgatacaagtt
cgacctgcagggccatccgaatatggaattaggtattttgatcgtgtaaacgctcaagat
aaaggaagatacttatttgaaacattccccgcgacaagagaaactttggccctcgatcca
aaatggaaccagatgtctgaattcaagcaatggcagatttctcccggctcaatgttgatt
gaaggacctgccgctccccagggcttgggattgccagggggccaaattcaaaaatacatt
cccaatttgaatgatttactggaggttaaataa
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