Agrobacterium vitis VAR03-1: RvVAR031_16430
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Entry
RvVAR031_16430 CDS
T08810
Symbol
dinB1
Name
(GenBank) DNA polymerase IV 1
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avf03400
]
RvVAR031_16430 (dinB1)
Enzymes [BR:
avf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RvVAR031_16430 (dinB1)
DNA repair and recombination proteins [BR:
avf03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
RvVAR031_16430 (dinB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
DNA_pol_lambd_f
POLH-Rev1_HhH
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
BCH54033
LinkDB
All DBs
Position
1:complement(1805682..1806836)
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AA seq
384 aa
AA seq
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MSHIDCDAFYASVEKRDNPDLIDKPLIIGGGKRGVVSTACYVARIHGVRSAMPMFKALEA
CPNAVVIPPNMEKYARVGRQVRAMMEELTPLVQPLSIDEAFLELKGTETLHHAPPALVLA
RLARRIESEIGITVSVGLSYCKFLAKVASDLQKPRGFSVIGEAEALEFLAPRPVTTIWGV
GKAFASTLERDGIRTIGQLQTMEESDLIRRYGSMGQRLARLSKGIDDRDVHTNDPAKSVS
AETTFFDDISRREDLVPHLRKLSEKVAWRLKKQELAGHTVILKLKSADFKLRTRNRRLDD
PTQLADRIFRTGLQMLEKEADGTKFRLIGIGVSDFADPSLADPPDLVDPDAARRAKAEAA
MDQLRMKFGKGMVETGFTFGSNKK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccatatcgattgcgatgccttttatgcctcggttgaaaagcgcgacaatccagac
ctgatcgacaagccattgatcattggcggcggtaagcgcggcgttgtttccacagcctgt
tacgtggcccgcatccatggtgtgcgctcggccatgccgatgttcaaggcattggaagcc
tgccctaacgccgtagtcattccgccgaatatggaaaaatacgcccgtgtcggtcggcaa
gtgcgggcaatgatggaggaattgacacctctggtgcaacccttgtccatcgatgaggcc
tttctggagctgaaaggcacagaaaccctgcaccacgcaccacccgcccttgtgctggca
cggcttgcgcggcgtattgaaagcgagatcggcatcaccgtttccgttggcctctcctat
tgcaaatttctggcgaaagtggcgtccgacctgcaaaaaccccggggattttcagtcatc
ggtgaggctgaagcgctggagtttctagcgccccgccctgtcaccacgatctggggcgtc
ggcaaggccttcgccagcaccttggaaagagacggcattcgtaccatcgggcaattgcaa
accatggaggaaagcgacctgatccggcgctatggcagcatgggccaacgactggcacgg
ctatcgaaaggcatcgacgaccgagatgtccataccaatgacccggccaaaagcgtctcg
gctgaaaccacgttctttgacgatatttcccgccgggaagatcttgttccccatttgcgc
aagctttccgagaaagtcgcgtggcgattgaaaaagcaggaactggctggacacaccgtt
atcttgaagctgaaaagcgctgacttcaaattacgcacccgcaatcgtcgcttggacgac
cccacccagctcgccgaccggatctttcgcaccggcctgcaaatgctggagaaggaagcc
gatggcacaaaatttcggctgatcggtatcggtgtcagcgattttgccgacccaagcctg
gccgaccccccggatctggtcgatccggacgccgcccgacgcgccaaggcggaagccgcc
atggaccaattgcggatgaaattcggcaagggcatggtcgaaaccggcttcaccttcggc
agcaataaaaaatag
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