Gillisella vitis VAR03-1: RvVAR031_16730
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Entry
RvVAR031_16730 CDS
T08810
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
avf
Gillisella vitis VAR03-1
Pathway
avf00970
Aminoacyl-tRNA biosynthesis
avf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RvVAR031_16730 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
avf03029
]
RvVAR031_16730 (gatB)
Enzymes [BR:
avf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
RvVAR031_16730 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
RvVAR031_16730 (gatB)
Mitochondrial biogenesis [BR:
avf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RvVAR031_16730 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Aconitase_B_N
Motif
Other DBs
NCBI-ProteinID:
BCH54063
LinkDB
All DBs
Position
1:1833463..1834965
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AA seq
500 aa
AA seq
DB search
MTLVDTRTPDPKRLIPGATGDWEIVIGMEVHAQVLSQSKLFSGASTTFGNAPNDNVSLVD
AAMPGMLPVINEECVRQAVRTGLGLKAKINKRSIFDRKNYFYPDLPQGYQISQFKDPIVG
EGKIIISLGPDRQGNFEDIEIGIERLHLEQDAGKSMHDQHPTMSYVDLNRSGVALMEIVS
KPDMRSSDEAKAYMTKLRSIVRYLGTCDGNMDEGSMRADVNVSVRKPGGEFGTRCEIKNV
NSIRFIGQAIEYEARRQIAILEDGGSIDQETRLFDPGKGETRSMRSKEDAHDYRYFPDPD
LLPLEFDDAFVQALKKDLPELPDDKKARFVASLGLSVYDASVLVSEKAIADYYEAVAAGR
DGKIAANWVINDLLGALNKAGKGIEETPVSPAQLGGIIDLIKAETISGKIAKDLFEIVFN
EGGDPADIVESRGMKQVTDTGAIEKAVDEIIAANPDQVAKVLAKPTLAGWFVGQVMKATG
GKANPQAVQALVKAKLGLEE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgtcgatacgcgcacccccgacccgaaacgcctgattcccggcgcgaccggc
gattgggaaatcgttatcggcatggaagtccatgcccaggtgttgagccagtccaagctg
ttttccggggcctcgaccacattcggcaatgcaccgaatgacaatgtgtcgctggtcgat
gcggccatgcccggcatgctgcctgttatcaacgaggaatgtgttcgccaggccgtgcga
accggtctcggcctgaaggcgaaaatcaacaagcgttcgattttcgaccgcaagaactat
ttctatcccgatctgccgcagggctaccagatctcgcagttcaaggacccgattgtcggt
gaaggcaagatcatcatttcgctcgggcccgatcgtcaggggaatttcgaggatatagaa
atcggcatcgagcggctgcatctggaacaggatgccggcaagtcgatgcatgaccagcat
ccgaccatgtcctatgtcgacctgaaccgctctggtgtggcgctgatggaaatcgtctcc
aagccggacatgcgctcgtctgacgaagccaaggcctatatgaccaagctgcgctccatc
gtgcgctatctcggcacctgcgacggtaatatggacgaaggctcgatgcgcgccgacgtc
aacgtttcggtgcgcaagccgggcggcgaattcggcacgcgctgcgaaatcaagaacgtc
aattccatccgcttcatcggtcaggccatcgaatatgaggctcgtcgccagatcgctatt
ctggaagacggcggctcgattgatcaggaaacccggctgtttgatccgggcaagggcgag
acccgctcgatgcgctccaaggaggatgcgcatgattatcgctatttccccgatcccgac
ctgctgccgctggaatttgacgatgctttcgtgcaggcgttgaaaaaggatctgccggaa
ttgcccgacgacaagaaggcgcggtttgtcgcctctttgggtctttccgtctacgatgcc
tcggttctggtgtctgaaaaggcgatcgccgattattacgaagccgtggctgcgggccgg
gacggcaagatcgccgccaactgggtgatcaacgacttgctgggcgccttgaacaaagcg
ggcaaaggcattgaagagactccggtttcgcctgcccagctcggtggtatcatcgacctg
atcaaggccgagaccatttccggcaagatcgccaaggacctgtttgaaatcgtcttcaac
gaaggcggcgatcccgccgatatcgttgagagccggggcatgaaacaggtgactgacact
ggcgctatcgaaaaagcggtggatgagatcattgccgccaacccggatcaggtcgccaag
gttctggccaagccgaccctggctggctggtttgtcggtcaggtgatgaaggcgactggt
ggcaaggccaatccgcaagcggtgcaggcgctggtcaaggccaagctgggcctggaggag
taa
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