Agrobacterium vitis VAR03-1: RvVAR031_16860
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Entry
RvVAR031_16860 CDS
T08810
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RvVAR031_16860
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avf01011
]
RvVAR031_16860
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avf03036
]
RvVAR031_16860
Enzymes [BR:
avf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
RvVAR031_16860
Peptidoglycan biosynthesis and degradation proteins [BR:
avf01011
]
Peptidoglycan biosynthesis and degradation
Amidase
RvVAR031_16860
Chromosome and associated proteins [BR:
avf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RvVAR031_16860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
AMIN
Motif
Other DBs
NCBI-ProteinID:
BCH54076
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Position
1:1847086..1848306
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AA seq
406 aa
AA seq
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MKQGKRPGVAILWLLVCIISGFAPAKAFSADRLAAFAARIAGDDARTRIVMDFDQKPETT
VRYIGNPDRIVVDLPATVFAFPADALVARGLFRDIRFGSIDATHSRIVLTTARPAKLVLT
DIRTNDEGQGFRLILDAEMTDNDTFSKLVASQAWEADAYNNGKSPRIEQAAPATDGEFLI
AVDAGHGGIDTGATGKTTNTPEKTVTLGFARALAVELNRQKGVKAFLTRDGDTFLSLSQR
VTLARQKGANLFISLHADMLGQANIRGATVYTISDKASDHLAEAAAARENQSDEVGGVDA
SAEPQEVSDILADLTRRETQAFSIAMAKSVVTSFDGQINLINNPHRFAGFRVLQAQDVPS
VLLELGFLSNKEDEKLLLDPAWRGKVVKLIAEAVKKYRQPLVAKGG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggcaagcggcctggcgtggcgatcctgtggctattggtctgtattatctcg
ggtttcgcgcctgcaaaagccttttcggcggatcgtctcgccgcgtttgcagcccggatt
gccggtgacgatgcccgcacccgtatcgtcatggatttcgaccagaagccggaaacgacc
gtgcgctatatcggcaatccggatcgcatcgtcgtcgatctgccagccaccgtctttgcc
tttccagccgatgcactggtggcccgtggcctgtttcgggatatccgtttcggctctatc
gacgctactcattcgcgtatcgtgctgaccacggcgcggcctgctaaactcgtcctcacc
gacattcgcacgaatgacgaggggcagggatttcggctgattctcgatgcggagatgacc
gataatgacacattttccaaactggtcgcttcccaggcctgggaggccgatgcctacaac
aatggcaagagcccgcgcatagaacaggcggcgccagcgacggatggcgagtttctgatt
gccgtcgatgccggccatggcggtatcgataccggggccacaggcaagaccaccaatacg
ccggaaaaaaccgtgacgctgggctttgcccgggcgctggctgtcgagcttaacaggcaa
aagggcgtcaaggccttcctgacccgcgatggcgatacgttcctgtccctgtcgcagcgc
gtgacgcttgcgcggcagaaaggcgcaaacctgtttatttcgttgcacgccgatatgttg
ggccaggccaatattcgcggcgcgaccgtttataccatttccgacaaggcatccgaccat
ctcgccgaagcggcggcagcgcgtgaaaaccaatcggacgaggtgggcggtgtcgatgcg
agcgccgaaccgcaggaagtttccgatattctggctgatctcacccggcgcgagacccag
gccttttccatcgccatggccaaatcggtggtgacgtcgttcgacggtcaaatcaacctg
atcaacaatccgcatcgctttgccggattccgggtgttgcaggcccaggatgtgccgtcc
gtgttgctagaattggggtttctgtccaacaaggaggatgagaagctcttgctcgatccg
gcctggcgcggcaaagtggtgaaactgatcgccgaggcggtgaagaaatatcgccagccg
cttgttgccaaaggtggttga
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