Agrobacterium vitis VAR03-1: RvVAR031_17310
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Entry
RvVAR031_17310 CDS
T08810
Symbol
rpsE
Name
(GenBank) 30S ribosomal protein S5
KO
K02988
small subunit ribosomal protein S5
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RvVAR031_17310 (rpsE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
avf03011
]
RvVAR031_17310 (rpsE)
Ribosome [BR:
avf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RvVAR031_17310 (rpsE)
Bacteria
RvVAR031_17310 (rpsE)
Archaea
RvVAR031_17310 (rpsE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5_C
Ribosomal_S5
Motif
Other DBs
NCBI-ProteinID:
BCH54121
LinkDB
All DBs
Position
1:1888385..1888954
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AA seq
189 aa
AA seq
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MAQEKRGSRDDRQNREERDSEFVDKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFG
HGKAREVPEAIRKATESAKRDLIFVPLRDGRTLHHDVHGRHGAGKVLLRSAKAGTGIIAG
GPMRAVFETLGMHDVVAKSTGSSNPYNMVRATFDALKHQVHPKDVAAQRGLKYATLQARR
AASGNGSEE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagaaaagcgtggttcgcgggacgaccgtcagaaccgtgaagagcgcgatagc
gaatttgtcgacaagctggtcgccatcaatcgcgtcgccaaggtcgtcaagggcggccgt
cgttttggtttcgctgctctcgtcgtcgtcggcgaccagaagggtcgcgttggcttcggt
catggcaaggcacgtgaagtgccggaagccatccgcaaggcaaccgaatccgccaagcgc
gacctgattttcgtaccgctgcgtgatggccgtacgctgcatcatgacgttcatggccgt
cacggcgccggtaaggtgctgctgcggtctgccaaggctggtaccggtatcatcgctggt
ggcccgatgcgcgccgttttcgaaacgctcggcatgcatgacgttgttgccaagtcgacc
ggttcgtcgaacccttacaacatggttcgtgcaacgttcgacgcgctgaagcaccaggtt
catccgaaggacgtcgctgcacagcgtggcctgaagtatgcgaccttgcaggctcgtcgt
gccgcgtccggcaacggttctgaagaataa
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