Agrobacterium vitis VAR03-1: RvVAR031_18180
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Entry
RvVAR031_18180 CDS
T08810
Symbol
hemN_2
Name
(GenBank) coproporphyrinogen-III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00860
Porphyrin metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAR031_18180 (hemN_2)
Enzymes [BR:
avf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
RvVAR031_18180 (hemN_2)
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
BCH54208
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All DBs
Position
1:1980741..1982093
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AA seq
450 aa
AA seq
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MPAKALLSKYAAAVPRYTSYPTAPHFHTGIDCGNYAQWLSLLGQGQTISLYIHIPYCDRL
CWFCACHTKHTLKYEPITAYLAALFSEIENTARLVGREAVVTAVHLGGGSPTMLRPQDMV
ALMDRLRANFTFADEAEISVEMDPNDLDEARYDALASIGLTRASLGVQDFDPVVQKAINR
LQTFEQTKSVVEQVRKRGATSVNCDILYGLPYQTLESLEKTVLDIVSLKPDRIALFGYAH
VPWMKKHQTLIPENALPDIVMRYEQMMRASAMLVAAGYDAIGIDHFALPEDSLAIAARQK
RLRRNFQGYTTDGADALIGLGASSISQLPQGYVQNMPATGEYQRLVSENGLAATRGIALS
GDDRVRAAVIERIMCEFGFSFAEIRQAFPDVAEDVIAEAKVFTASNGDDLCRIDRECFNL
TPTGRLFARSVAATFDCYFSSGKARHSIAV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaagcgcttctctcaaaatatgccgccgccgttccgcgctacacgagttat
ccgacggcgccgcattttcataccggcatcgactgcggcaattatgcgcagtggctatcg
ctgctggggcaggggcagacgatctctctttatattcatatcccctactgcgacaggctc
tgctggttttgcgcctgccataccaaacatacactaaagtatgagccgataaccgcttat
cttgctgcgcttttcagcgagatcgaaaataccgccaggcttgtcggtcgcgaagcagtg
gtgacggctgtgcatctcggcggcggctctcccaccatgctgcgcccgcaggacatggtg
gcgctgatggaccggctccgggcaaattttacctttgccgacgaggctgaaatcagcgtc
gaaatggacccgaacgatctcgacgaagcccgctacgacgcgcttgcgtccattggtttg
acgcgggcaagtctcggtgttcaggatttcgatcccgtggttcagaaggcgatcaaccgt
ctccagaccttcgagcagactaaatcagtggttgaacaggtgcgtaagcgcggtgccacc
tcggtcaattgcgatattctctatggtcttccctatcagaccctcgaaagtctggagaaa
actgtcctcgatatcgtgtcattgaagccggatcggatcgctctattcggctatgcccac
gtgccctggatgaaaaagcatcagacgctgatccccgagaatgccttgcctgacatcgtc
atgcgctatgaacagatgatgagggcctcggccatgctggttgcggctggttatgatgcc
attggaatcgaccattttgcattgcccgaggatagtttggctatcgcggcacgacaaaag
cggctgcggcgcaatttccaggggtacacgactgacggcgccgatgccttgatcggactt
ggcgcttcttcgatcagccaactgccgcaaggctatgtacagaacatgcccgcgacggga
gaatatcagcgtcttgtcagtgaaaatgggcttgcagcgacaagaggcattgctctgagc
ggcgatgaccgggtgcgtgctgccgtcatcgaacggatcatgtgcgagttcggcttttcc
tttgccgagatccggcaagcttttccagatgtcgccgaggatgtgatcgcagaagccaag
gtattcacggcttccaacggtgacgacctctgccggatcgaccgggagtgttttaatctg
acccccaccgggcggctctttgcccgcagcgtcgcggcaacgttcgattgctacttttcc
agcggcaaggcccgtcattccattgcggtttga
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