Agrobacterium vitis VAR03-1: RvVAR031_18620
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Entry
RvVAR031_18620 CDS
T08810
Symbol
fixN
Name
(GenBank) cytochrome c oxidase, cbb3-type subunit I
KO
K00404
cytochrome c oxidase cbb3-type subunit I [EC:
7.1.1.9
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00190
Oxidative phosphorylation
avf01100
Metabolic pathways
avf02020
Two-component system
Module
avf_M00156
Cytochrome c oxidase, cbb3-type
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RvVAR031_18620 (fixN)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_18620 (fixN)
Enzymes [BR:
avf01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.9 cytochrome-c oxidase
RvVAR031_18620 (fixN)
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Gene cluster
GFIT
Motif
Pfam:
COX1
Motif
Other DBs
NCBI-ProteinID:
BCH54252
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All DBs
Position
1:2027565..2029205
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AA seq
546 aa
AA seq
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MNYTFETMVLAILAFAALLGAGFAYDSLFAAHMWVAFFVLLGATVVMLRHIRFAPVTAGV
SSRAAAQPKSEYFDEVIRYGVIATVFWGVIGFLVGLVIALQLAFPDLNFGPWLNFGRLRP
LHTSAVIFAFGGNALIITSFYVVQRTCRSRLFGGTLGWFVFWGYNFFIVMAATGYLLGIT
QGREYAEPEWYVDIWLTIVWVAYLIAFLGTILTRKEPHIYVANWFYLAFIVTIAMLHIVN
NLAIPVSFLGVKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFVPKQAGRPVYS
YRLSIIHFWALIFMYIWAGPHHLHYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSG
AWDKIRTDPIIRMMVMAIAFYGMSTFEGPMMSIKTVNSLSHYTEWTIGHVHSGALGWVGM
ITFGAIYYLTPKLWHRDRLYSMRMVNWHFWLATLGIVVYAAVLWVAGIQQGLMWREYDAQ
GFLVYSFAETVKAMFPYYVMRAVGGGLYLAGSLVMAWNITMTILGHQRNEAPLAGSAMAP
VLQPAE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaattatactttcgaaaccatggttttggccattctggcctttgccgcgctgctcggg
gcgggtttcgcctatgacagcctgtttgctgcccatatgtgggtggcctttttcgtactt
ctgggggcgacggtcgtcatgttgcgccatatccggtttgcgccggtgacggctggtgtg
tcgagtcgtgcagcggcccagcccaagtctgaatatttcgacgaagtcattcgctatggt
gtcatcgccacggtgttctggggtgtgatcggctttcttgtcgggctggtcatcgcgctg
caactggcctttcccgatctgaatttcggcccctggctcaatttcgggcggctgcggcct
ttgcacacgtctgccgtgattttcgcctttggcggcaatgccctgataatcacgtccttt
tacgtcgtgcagcgcacgtgtcgcagccggttgttcggcggcacgctcggctggttcgtg
ttctggggctataatttcttcatcgtcatggcggccactggctatctgctcggcatcacc
cagggtcgtgagtatgcggaacccgaatggtatgtcgatatctggctgacgattgtctgg
gtcgcttatctcattgccttcctgggtacgatcctgacccgcaaggaaccgcatatctat
gtggcgaactggttctacctggcctttatcgtcaccattgccatgctgcatatcgtcaac
aatctggcgatcccggtctctttcctcggcgtcaaaagctactcggctttttcaggggtg
caggatgcgctgacgcaatggtggtacgggcataatgccgtcggcttcttcctgacggcg
ggcttcctgggtatgatgtactacttcgtgcccaagcaagccggtcgcccggtctattcc
taccggctgtcgatcatccacttctgggcgctgatcttcatgtatatctgggccggtccg
catcacctgcattataccgcgctgcccgattgggcgcagacgctgggcatggtgttctcg
atcatgctgtggatgccgtcctggggcgggatgatcaacggattgatgacgctttcgggc
gcctgggacaagatccgtaccgatccgatcatccgaatgatggtgatggccattgccttc
tacggcatgtcgaccttcgaaggcccgatgatgtcgatcaagacggtcaattcgcttagc
cactataccgaatggaccattggtcacgttcactccggcgctctcggctgggtcggcatg
atcaccttcggcgcgatctactacctgacgcccaagctctggcaccgcgaccgcctctat
tcgatgcggatggtcaactggcacttctggctcgccacgctcggcatcgtcgtctacgcc
gccgtgctctgggtggccggtatccagcagggtctgatgtggcgcgaatacgatgcgcag
ggcttcctggtctattccttcgcggaaaccgtcaaggccatgttcccctactatgtcatg
cgcgccgtcggcggcgggctctatctcgccggcagcctggtcatggcctggaacatcacc
atgaccattctcggccaccagcgcaacgaggcgcctcttgcaggttcggccatggcgcct
gtcctgcaaccggcggagtaa
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