Agrobacterium vitis VAR03-1: RvVAR031_18780
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Entry
RvVAR031_18780 CDS
T08810
Name
(GenBank) pyruvate dehydrogenase complex E1 component subunit beta
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00010
Glycolysis / Gluconeogenesis
avf00020
Citrate cycle (TCA cycle)
avf00620
Pyruvate metabolism
avf00785
Lipoic acid metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01120
Microbial metabolism in diverse environments
avf01200
Carbon metabolism
avf01210
2-Oxocarboxylic acid metabolism
Module
avf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RvVAR031_18780
00020 Citrate cycle (TCA cycle)
RvVAR031_18780
00620 Pyruvate metabolism
RvVAR031_18780
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RvVAR031_18780
Enzymes [BR:
avf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
RvVAR031_18780
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GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
QRPTase_N
Motif
Other DBs
NCBI-ProteinID:
BCH54268
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All DBs
Position
1:2047345..2048730
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AA seq
461 aa
AA seq
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MPINILMPALSPTMEEGTLSKWLKAEGDSVKSGDVIAEIETDKATMEVEAVDEGVIGKLL
IEAGTQNVKVNTPIAVLLQDGESASDVSAPKAEEAAAPAVAQEEKPTETGSASAPVPAQP
ISSAASDPSIPAGTEMVSMTVREALREAMAEEMRANDDVFIIGEEVAEYQGAYKITQGLL
AEFGDRRVVDTPITEHGFAGVAVGAAMAGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMS
GGQMGAPIVFRGPNGAAARVGAQHSQDYAAWYSQIPGLKVISPYTAADAKGLLKAAIRDP
NPVVFLENEILYGHSFDVPKLDDFVLPIGKARVHKTGKDVTIVSWSIGMTYATKAVEELT
KLGIDVELIDLRTIRPMDLPTVIESVKKTGRLVVVEEGYPQSSVGDFVANRIQREAFDYL
DAPVLTVAGKDVPMPYAANLEKLALPNVGEVVQAVKSVCYK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcaatattctcatgcccgccctgtctccgacaatggaggaaggcacgctgtcc
aaatggctgaaagccgaaggcgatagcgtaaaatccggcgatgtgatcgccgaaattgaa
accgacaaggcaaccatggaagtggaagccgtggatgaaggcgtgatcggcaagctgctg
attgaagccggaacccagaacgtcaaggtcaacacgccgattgccgtgctgttgcaggat
ggcgaaagtgcctccgacgtttcggctcccaaggctgaagaagcagcagcacctgccgtt
gcacaggaagaaaagccgacagaaaccggttcggcttccgcacctgttccggcgcagccg
atttccagcgctgccagcgatccgtccattcctgccggaacggaaatggtgtcgatgacc
gtgcgtgaagccctgcgcgaagccatggccgaagaaatgcgcgccaatgacgatgtgttc
atcatcggcgaggaagtggcggaataccagggtgcctacaagatcacccagggcctgctt
gccgaattcggcgaccgccgcgtggtcgataccccgatcaccgagcatggttttgccggt
gtggctgtgggtgccgccatggcgggcctgcgcccgatcgttgagttcatgaccttcaac
ttcgccatgcaggcgattgaccagatcatcaactcggctgccaagacgctctatatgtcc
ggcggtcagatgggcgctcccatcgtgttccgtggcccgaacggcgctgcggcccgcgtt
ggcgcccagcacagccaggattatgccgcatggtatagccagatccccggcctgaaggtc
atctcgccctacacggcagccgatgccaagggcctgctgaaagcggcgatccgcgatccg
aaccctgtggtcttccttgaaaacgaaattctctacggtcacagcttcgatgtgccgaag
ctggatgatttcgttctgccgattggcaaggcacgcgttcacaagaccggcaaggatgtc
accatcgtatcctggagcattggcatgacctatgcgaccaaggccgtggaagagctgacc
aagcttggcatcgatgtcgaactgatcgacctgcgcaccatccgtccgatggacctgcca
acggtgattgagtcggtcaagaagaccggtcgtcttgtcgtggtggaagaagggtatccg
cagtcgtccgtcggcgatttcgtggccaaccgcattcagcgcgaagccttcgattacctc
gatgcgcctgttctgaccgtggctggcaaggacgtgccgatgccttacgcggccaacctt
gaaaagctcgctctgccgaatgtcggcgaagtggtccaggccgttaaatccgtctgctac
aaataa
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