Agrobacterium vitis VAR03-1: RvVAR031_19190
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Entry
RvVAR031_19190 CDS
T08810
Name
(GenBank) ABC transporter ATP-binding protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_19190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_19190
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
RvVAR031_19190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
AAA_23
AAA_27
AAA_22
SMC_N
Motif
Other DBs
NCBI-ProteinID:
BCH54309
LinkDB
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Position
1:2091949..2093511
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AA seq
520 aa
AA seq
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MSHSKEVAPSPLLSVRSLTKRFGTFAACDGIDLDILPGEIHALLGENGAGKSTLVKMLFG
VLTPSAGEILWDHQGPVDIASPAQARQLGVGMVFQHFSLFEALTVAENIALSLDRSVSIG
EIAEQARTLSLSYGLPLDPSAHVADLSVGERQRIEIVRALLQNPKLIILDEPTSVLTPQE
ADKLFETLEKLRAEGRSVLYISHRLEEVQRICDRATVLRHGKVTGTCDPRQETPATLARM
MVGADVTGVTPDVAAPVGAELLTISNLGVDARTPFSMALKDVSLNVRAGEILGLAGVAGN
GQSELFDVLSGEYTVRDHQAIQLCGQPVGRFGINRRRLIGAGFVPEERHGHAAVTGLSLS
DNLLLARHGSDRGRYVSGLFGLIRHSAIKASTRQICEAMDVRKSGEDPVAGSLSGGNLQK
FIVGRELDRKPAVLVVNQPTWGVDAGAASRIRQALIDLAAQGSAVVIISQDLDEIFEVST
SIAAISEGRLSKVYPSGVMNREKIGLLMGGLHGLESADAH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcatagcaaagaagtagcgccatctccgctgctttcggttcgcagcctgacgaag
cgattcggcacatttgccgcctgcgatggcatcgatctcgacattcttcccggcgaaatc
catgctctgctgggagaaaacggcgcgggtaaatcaaccctcgtcaaaatgctgtttggt
gtgttgacgccaagcgcgggcgaaatcctttgggatcatcaaggccccgtcgacattgct
tcgcctgcgcaagcgcgacagcttggcgtcggtatggtctttcagcatttttcgctgttt
gaagcgctgaccgtggctgagaatatcgccttgtctctggaccgttcggtgtcgattggc
gaaatcgccgaacaggcgcggaccttgtcactgtcttacggtttgccgcttgatccttcg
gcccatgtcgcggatttgtcggttggcgagcgtcagcggatcgaaatcgtccgggcattg
ttgcaaaacccgaaactgatcattctcgacgaaccgacctcggtgctgaccccgcaggag
gccgacaagctgtttgaaacgcttgaaaagctgcgggccgaagggcgctcagtgctctat
atcagccaccggttggaagaggttcagcgcatttgtgaccgtgccacggttttacgccac
ggtaaggtgacagggacctgcgatccacgccaggaaaccccggccacgttggcgcgaatg
atggtgggcgcagacgttacgggtgtgacgccggatgtcgctgctccggtgggtgcggaa
ctgctcaccatcagcaatcttggcgtcgacgcacgcacgccgttctccatggcgctgaaa
gatgtgtcgctgaacgttcgtgccggtgaaatcctcggacttgcgggcgtggctggcaat
ggccagagcgaattgttcgatgtgctgtccggtgaatataccgtgcgtgaccatcaggct
attcagctctgcggccagccggtcgggcgtttcggcatcaaccggcgtcggttgatcggc
gcggggtttgtgccggaagagcgccatggtcatgcggctgttaccgggctttcgctgtcg
gacaatctgctgttggcgcggcatggttcggatcgtgggcgttatgtctccggcctgttc
ggactgatccgccacagcgccatcaaggcgtccacccggcagatttgcgaggcgatggat
gtgcgcaagagtggtgaggacccggtcgccggatcgctttcgggcggcaacctgcaaaaa
ttcattgttgggcgtgagctcgaccgcaaaccggcggtgctggtcgtcaaccagccgacc
tggggtgtggatgcgggtgcggccagccgtattcgtcaggctctgatcgatcttgcggcg
caaggctcggcggtggtgatcatcagccaggatctggacgagattttcgaggtctcgacg
tcgattgcggcgatttccgagggtaggctgtcgaaagtctacccaagcggcgtgatgaac
cgcgagaagatcgggttgctgatgggcggcttgcatggtctggagagcgccgatgcgcat
tga
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