Agrobacterium vitis VAR03-1: RvVAR031_19990
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Entry
RvVAR031_19990 CDS
T08810
Symbol
tgt
Name
(GenBank) queuine tRNA-ribosyltransferase
KO
K00773
queuine tRNA-ribosyltransferase [EC:
2.4.2.29
]
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avf03016
]
RvVAR031_19990 (tgt)
Enzymes [BR:
avf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.29 tRNA-guanosine34 preQ1 transglycosylase
RvVAR031_19990 (tgt)
Transfer RNA biogenesis [BR:
avf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RvVAR031_19990 (tgt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGT
SMN_YG-box
Motif
Other DBs
NCBI-ProteinID:
BCH54389
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All DBs
Position
1:complement(2180095..2181225)
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AA seq
376 aa
AA seq
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MSEQFTFTLKATSGKARLGEITMPRGTIRTPAFMPVGTVGTVKAMYLDQVREGGADIILG
NTYHLMLRPGAERVARLGGLHELIRWPQPILTDSGGFQVMSLSGLRKLDEQGVTFKSHID
GSLHHMSPERSIEIQGLLDSDIQMQLDECVALPAEPREIERAMEMSLRWAERCRVAFGEQ
PGKAMFGIVQGGDQPGLRIRSAEGLKQLDLKGYAVGGLAVGEPQEVMLSMLDITLPVLPT
EKPRYLMGVGTPDDMLKSVARGIDMFDCVMPTRSGRHGLAFTRRGKVNIRNARHAEDKRP
LDEQSSCPAARDYSRAYLHHLVRSNEALGGMLLSWNNLSYYQELMQGIRQSIAEGRFEDF
MTETMECWARGDIDAV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagttcacgtttaccctgaaagccaccagcggcaaggcccggcttggcgaa
atcaccatgccgcgcggcacgatccgcaccccggccttcatgccagtcggcacggtcggc
acggtcaaggccatgtatctcgatcaggtgcgggaagggggtgccgatatcattctgggc
aatacctaccacctgatgctgcgccctggtgccgagcgtgttgccagactgggcggtttg
cacgagttgatccgctggccgcagccgatcctgaccgatagcggcgggtttcaggtcatg
tcgctctccggtcttcgcaaattggatgagcagggcgtcaccttcaagagccatatcgac
ggttcgctgcatcatatgtcgccggagcggtccatcgaaatccaaggcctgctggacagc
gatatccagatgcagttggacgaatgcgtggccttgcccgctgaaccgcgtgaaatcgag
cgcgccatggaaatgtcgttgcgctgggccgagcgctgccgcgtcgcctttggcgaacag
cctggcaaggcgatgttcggtatcgtgcagggcggcgatcagccaggcttgcgcatccgt
tccgccgaagggctgaagcaattggacctgaaaggctatgccgtcggcgggttggcggtt
ggtgagccgcaggaggtgatgctcagcatgctggacatcaccctgccggtgctgccaaca
gaaaaaccgcgctacctgatgggcgttggcacgcccgatgacatgttaaaatccgttgcg
cgtggcatcgatatgttcgattgcgtcatgccgacccgttctggccgccatggtctcgcc
ttcacccggcgcggcaaggtcaatattcgcaatgctcgccacgcagaagataaacgcccc
ctggacgaacaatcgtcctgcccggcggcacgagattattcacgggcctatctgcaccat
ctggtgcgttcgaatgaagcactgggcggcatgctgttgtcctggaacaacctatcctat
tatcaggagttgatgcagggcatccgccagtcgattgccgaaggcaggtttgaggacttc
atgacggaaaccatggaatgctgggcaaggggcgatatcgatgcggtgtaa
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