Agrobacterium vitis VAR03-1: RvVAR031_20240
Help
Entry
RvVAR031_20240 CDS
T08810
Symbol
rpe
Name
(GenBank) ribulose-phosphate 3-epimerase
KO
K01783
ribulose-phosphate 3-epimerase [EC:
5.1.3.1
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00030
Pentose phosphate pathway
avf00040
Pentose and glucuronate interconversions
avf00710
Carbon fixation by Calvin cycle
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01120
Microbial metabolism in diverse environments
avf01200
Carbon metabolism
avf01230
Biosynthesis of amino acids
Module
avf_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
avf_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RvVAR031_20240 (rpe)
00040 Pentose and glucuronate interconversions
RvVAR031_20240 (rpe)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RvVAR031_20240 (rpe)
Enzymes [BR:
avf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.1 ribulose-phosphate 3-epimerase
RvVAR031_20240 (rpe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
BCH54414
LinkDB
All DBs
Position
1:2202200..2202877
Genome browser
AA seq
225 aa
AA seq
DB search
MTPPLLIAPSILAANFSRLGAEVADVVEAGADWIHLDVMDGHFVPNISFGPAVIKALRPH
TKAVFDCHLMIAPADPFLAAFADAGCDYITVHAEAGPHLHRSLQTIRALGKKAGVSINPA
TPVSMLENIIDDVDLILIMSVNPGFGGQSFIPAAAGKIAQARALIGDRPIALEVDGGITV
ETAPIATKAGANVLVAGSAIYKGQGVDAYRETVTALRHAAEGGRS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgacacctccgctgctgatcgccccttcgatcctcgccgccaatttttcccggctgggg
gctgaagttgccgatgttgtggaggcgggcgccgactggattcatctcgatgtgatggat
ggccatttcgtgccgaatatctctttcggcccggctgttatcaaggcgctgcggcctcat
accaaagcagtgttcgactgccatctgatgattgctcctgccgatccgttcctggctgct
tttgccgatgccggatgtgattatatcaccgtccatgccgaagccgggccgcatctgcat
cgttcgctgcaaaccattcgcgctctcggcaagaaggcaggcgtatcgatcaatccggcc
acgccggtttccatgctggaaaacatcattgatgatgttgacctgatcctgatcatgagt
gtcaatcccggctttggtgggcagagctttatcccggctgcggcgggcaagatcgcccag
gcaagggcgctgattggcgacaggccgattgcgctggaagtcgatggcggcatcaccgtt
gaaacggcgccgattgccacaaaggccggagccaatgtgctggtggcaggatctgcaatc
tacaagggccagggtgtcgatgcctaccgcgaaacggtgacggcattgcgccatgcggct
gaaggaggccggtcttga
DBGET
integrated database retrieval system