Agrobacterium vitis VAR03-1: RvVAR031_20460
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Entry
RvVAR031_20460 CDS
T08810
Symbol
gntZ
Name
(GenBank) 6-phosphogluconate dehydrogenase, decarboxylating
KO
K00033
6-phosphogluconate dehydrogenase [EC:
1.1.1.44
1.1.1.343
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00030
Pentose phosphate pathway
avf00480
Glutathione metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01120
Microbial metabolism in diverse environments
avf01200
Carbon metabolism
Module
avf_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
avf_M00006
Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RvVAR031_20460 (gntZ)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RvVAR031_20460 (gntZ)
Enzymes [BR:
avf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.44 phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating)
RvVAR031_20460 (gntZ)
1.1.1.343 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating)
RvVAR031_20460 (gntZ)
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GFIT
Motif
Pfam:
6PGD
NAD_binding_2
Shikimate_DH
F420_oxidored
ApbA
3HCDH_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BCH54436
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All DBs
Position
1:complement(2228739..2230169)
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AA seq
476 aa
AA seq
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MQQAEIGLIGLGVMGSNLALNIAEKGNRIAVFNRTPARTHEFIGEAGDLAGNIIGCDTIE
EFVAAIRPPRPIIIMIKAGDAVDQQMELLKPHLSANDIMIDAGNANFRDTIRRFDNLKDS
GLTFIGMGVSGGEEGARHGPSIMVGGLEESWKRVEKVLTSISAKFNGDPCVAWLGNDGAG
HFVKTIHNGIEYADMQMIAEIYGILRDGLGMSASEIGDVFGQWNKGRLNSYLIEISEKVL
KAKDPITGNPMVDVIVDAAGQKGTGKWSVIEAQNLGVAATGIEAAVAGRVLSSQKQERVA
AEAIFGLPKPTEKPHDGMAFLADLESALLAAKIAAYAQGFAVMAAASKEFGWSLPMPTIA
KIWREGCIIRSQFLDEITSAFTKDPDVANLIVTPAFSKMVKDSDAALRRVVSYAALSGLP
VPALSSALSYFDSYRRGRGTANLIQAQRDFFGAHGFARVDGKDYPHGPWGSGAAIY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggcggaaatcggactgatcggccttggcgttatgggatcgaacctggcgctc
aatattgccgagaaaggcaaccgcatcgcggtcttcaaccggacaccggcgcgcacgcat
gaattcatcggtgaggcaggcgaccttgccggcaatatcatcggctgcgacacaatcgag
gagtttgtggctgccattcgcccaccgcgcccgatcatcatcatgatcaaggctggcgac
gctgtcgatcagcagatggaattgctcaagccgcatctgtcggccaatgacatcatgatc
gatgcgggcaatgccaatttccgcgacacgatccgccgtttcgacaatctgaaggatagc
ggcctgacctttatcggcatgggcgtttccggtggtgaagaaggcgcgcgccatggcccg
tcgatcatggttggtggcctggaggaaagctggaagcgggtcgagaaggttctcacgtcg
atttccgccaagttcaatggtgacccctgcgtggcctggctcggcaacgatggggccggt
catttcgtcaagaccatccataatggcatagaatatgccgatatgcagatgatcgccgaa
atctatggcattctgcgtgatggacttggcatgtcggccagcgaaatcggcgatgtattc
ggccagtggaacaagggtcgcctgaattcctacctgatcgaaatctccgaaaaggtgctg
aaagccaaggacccgattacaggcaatccgatggtagatgtcatcgtcgatgccgcaggc
cagaaaggcaccggcaaatggtcggtgatcgaagcgcagaatctcggtgttgcggcaacg
ggcatcgaagctgccgtggcgggacgtgtgctgtcttcgcaaaagcaggaacgcgttgcg
gcggaagcaattttcggcctgccgaagccaaccgaaaagccccatgacggcatggctttc
ctggccgatctggaaagcgcgctgctggcggcaaaaattgcggcctatgcccagggcttt
gcggtgatggctgcggcctccaaggaattcggctggtcgctgccgatgccgacgattgcg
aaaatctggcgggaaggctgcatcatccgctcgcaattcctcgacgaaatcacctcggcc
tttaccaaggaccctgacgtggcaaacctgatcgtcacgcccgccttctcgaaaatggtc
aaggacagcgatgcagcccttcgccgcgtcgtttcctacgcagccctttccggcctgccg
gttccagcgctttcctcggcgctgtcctactttgacagctaccgtcgcggtcgcggcacc
gccaacctcatccaggcgcagcgcgacttctttggtgcccacggttttgcgcgggtggac
ggcaaggattatccgcacggcccctggggcagcggtgcggcgatctactga
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