Agrobacterium vitis VAR03-1: RvVAR031_20760
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Entry
RvVAR031_20760 CDS
T08810
Symbol
cspA3
Name
(GenBank) cold-shock protein
KO
K03704
cold shock protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
RvVAR031_20760 (cspA3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Rho_RNA_bind
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BCH54466
LinkDB
All DBs
Position
1:complement(2265482..2266030)
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AA seq
182 aa
AA seq
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MEFSGLSEEPLDLVEITGVVKWFDVAKGFGFIVPDNGMQDVLLHVTCLRRDGYQTILEGT
RIVALIHKRDRGYQAFRVLSMDQSTATHPSQMPPMRTHVQVTPSSGLERVLVKWFNRTKG
FGFLTRGEGTEDIFVHMETLRRFGLTELRPGQTVLVRFGNGDKGLMAAEIHPDNPAPHVM
AH
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtggaattcagcgggctctcggaagagcccctggatcttgtcgaaatcaccggtgtggtg
aaatggttcgacgttgccaagggttttggctttatcgtaccggataatggcatgcaggac
gtcttgctgcatgtgacctgcctgcgccgggacggttaccagaccatcctggagggaaca
cggatcgtcgcgctgatccataagcgcgatcggggctatcaggccttccgggttctgtcg
atggaccaatcgactgcgacgcatccctcacaaatgccgcctatgcggacccacgttcag
gtgacgccatcgagcgggttagagcgggttctggtcaaatggttcaatcgcaccaaaggc
ttcggtttcctgacgcggggcgagggcaccgaggacattttcgttcacatggaaacgctg
cgtcgattcggcttgacagaattgcggcccggacagacagtgctggtgcgcttcggcaat
ggcgacaaaggcctgatggcggcagaaattcacccggataaccctgcgccgcatgttatg
gcgcattga
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