Agrobacterium vitis VAR03-1: RvVAR031_21810
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Entry
RvVAR031_21810 CDS
T08810
Name
(GenBank) membrane protein
Organism
avf
Agrobacterium vitis VAR03-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Competence
DUF4131
Motif
Other DBs
NCBI-ProteinID:
BCH54571
LinkDB
All DBs
Position
1:complement(2376646..2379654)
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AA seq
1002 aa
AA seq
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MPDTAEWELVRQKEARPARASPWDRRASKTLFDEVLRRADIKLEDEAEAPDFEGHFSASP
LLVSRWQRLLRALHRDALQELAYGRTFLFLPVLLGLGAIWWFTRPHDLPRLPVFLTFCAA
GLVWLRVRYRHPVLAAVCGIATLGLAGMLLADVQTARLDTIIIDSAVTTVVRGKVVSVEP
NADGNQRYVIALHQTRFPSLKRMPQQVALLARGAHVPFNPGDWIEGRARLSPPSGPALPG
LNDFAFASYFAGTGAIGYFYQPPKSFMPGPEIAPPDFWERAGIRLDETTQELRNGISDRI
RAIVPGDAGAFAVAIVTGERRGLSEEANNDLRVSGLAHIISISGLHMALAGGLFFVGIRR
LLSLVPGMAEARSIKKIAAAGAIATTTGYFLISGYDIAAQRAYLMMVIMLSAAFFDRPVL
SLRNAALAAILVIILSPSQVMGPSLQMSFAATFALIAGFDLWRQRPRLPPILPAIPALTV
LKPFMTLVSGILMTSALGGFSTAMFSAAHFHRVGLHGLEANLLAAPLMSMLVMPAAMIGV
LLMPFGLDQWPIQLMGLGLEGVLMIASKVASWGAGFTFGRFEWWFLPVSATGLLILTLMK
TRLRLIGVAMMLTAFGYEAIKTDPPLPDLAITEDGQLFALFRTDDRHVLTVATNKKRPPG
FVFNQWRSVLDIADPIAPEILPKLASVEMEKDQQGAGQTTRDGKTKAKTGGQKAKGREPV
EPQQAMAEMMAAKEKADKKPDLFHCRTDAFCLARLSNGWTVSLVQNRDYSEAACALSDLI
VSTEASRDAVCKAPMASTAPTENTGATVIRDATEDGTGLDVESERMMADGDELASDNNSP
SVRSQTINRTQAGGASAASASPAPRQGVELPMASQVSDGTSNSARSSTPLIEPSETVAFL
QTEKAANAAPMLSRPPKVLTRNDLRRFGAMEITLGDPATRTLHIVTAFQNQYRPWTRHRY
FDWRSNRYDRPDGRTYANVPSAANDDIQSGAGYVSEVSDNDE
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgccggatacggcggaatgggaactggtcaggcaaaaagaagcgcgtcccgcgcgcgct
tcgccatgggataggcgcgcttccaaaaccctgtttgacgaggtcctgcggcgtgcggac
atcaagctggaggacgaggctgaagcccctgatttcgagggccacttcagcgcgtcgccg
cttttggtgtcccgctggcagcgccttctgcgcgctcttcatcgggacgctttgcaagag
cttgcctatggccggacatttctgtttttacccgttctgctcgggctcggtgcgatctgg
tggtttacccgtccgcatgatcttccccgcctgccggtcttcctgactttctgtgcagcc
ggattggtctggctgcgggtccgctaccgtcatccggttctggccgcggtctgcggcatt
gcaactctcggtcttgccggcatgttgctggccgatgtgcaaacggcgcgtctggacacg
atcatcatcgacagtgcagtgacgacggtggtgcgcggcaaagtggtttcggtagagcca
aatgcggatggcaatcaaagatatgtgattgcactgcaccaaacccgcttccccagcctg
aaacgcatgccgcagcaggtagcgcttctggcccgcggcgcgcatgtgcccttcaatccc
ggcgactggatcgagggcagggcgcggctctcgccgccgtctggaccggccttgccaggc
ttgaacgattttgcctttgcctcgtattttgccgggaccggggcgatcggttacttttac
cagccccccaaatcattcatgccgggaccagagatcgcgccgccggacttttgggagcga
gccggaatcaggctggatgaaacgacacaggaattgcgcaatggcatttccgaccgtatc
cgggctatcgtgccgggcgatgcgggcgcgtttgccgtagcgattgtgaccggcgagcgg
cgcggcctttcggaggaggccaataacgatcttcgcgtttccggccttgcccatatcatt
tcgatttccggtctgcatatggctctggccggtgggctgttctttgtggggatccggcgg
ctcctaagccttgtgcctggaatggcggaggcccgctcgatcaagaagattgccgcagcg
ggtgcaatcgccaccacgaccggctattttttgatttccggctatgacattgccgcccag
cgcgcttatctgatgatggtcatcatgctgtcggcggcattcttcgatcggccagttctt
agcctgcgcaatgcggcgctggcggctattcttgtgattatcctttcgccgtcgcaggtc
atggggccgagcctgcaaatgtcctttgctgctacttttgcgctgatcgccggtttcgac
ctctggcgccagcgaccgagattgcctcccattctgccagcgatcccggcgctgacagtt
ttgaagccgtttatgacgctggtcagcggtattctgatgacctcagcacttggtggtttt
tccaccgcgatgttctcagcggcgcatttccaccgggtcggattgcatgggttggaggca
aatctcctggcggctcctctgatgtcgatgctcgtcatgccagccgcaatgatcggcgtg
ttgctcatgccttttggtctggaccagtggccgatccagttgatggggcttggacttgag
ggcgtgttaatgattgccagcaaagtcgcgagctggggtgctggcttcaccttcggccgg
ttcgagtggtggttccttccggtctcggcaaccggtctgctgatactgaccctaatgaag
acgcggctcaggctgattggtgtagcgatgatgctgacggcgtttggctatgaggcgata
aaaaccgacccaccgctgcccgatctcgccataaccgaggatggccaactctttgctctg
tttcggaccgacgaccgccacgtcttgaccgttgccaccaacaagaagcgtccgccgggt
ttcgttttcaaccaatggcgctcagtgctcgacattgccgatccgattgcgcctgaaata
ttgcccaagctggcatctgtcgaaatggagaaagaccaacagggagcggggcaaacaacg
agggacggaaaaacaaaagcaaagacgggcggccaaaaagccaagggaagagagccggta
gagccgcaacaggcgatggcggagatgatggcggcaaaggagaaggccgataaaaaacct
gatcttttccattgccgaaccgatgctttttgtctcgcgaggctcagcaatggttggacc
gtcagcctggtgcagaaccgcgactatagcgaggccgcctgcgccttgtccgacctgatc
gtctcgactgaggccagtcgcgatgccgtctgtaaggcgccgatggcatccactgctccc
accgaaaacaccggagcgaccgtaattcgggacgctacggaagacggcactgggttggac
gttgaaagtgaacggatgatggccgatggtgatgagctggcatctgacaacaacagcccg
tccgttcgctcccaaacaatcaaccgaacgcaagcgggaggcgcttccgcagccagtgca
agcccggcaccacggcagggcgttgaattgcccatggctagccaagtctcagacggcacc
tcgaactcggcccggagttccacacccctcatagaaccgagtgaaaccgtcgccttctta
caaaccgagaaggctgcaaacgctgcaccgatgctgtcacgacccccgaaagtcctgacc
cgcaacgatctgcgacgattcggtgcaatggaaatcacgcttggcgatcccgccacccga
acgctgcatatcgttacggcatttcaaaatcagtatcggccctggactcgccatcgttac
tttgattggcgcagcaatcgctacgaccggccggatggcaggacctacgccaacgtgcca
tctgctgccaacgacgacatccagtcaggcgctggttatgtcagcgaggttagtgataac
gacgaataa
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