Agrobacterium vitis VAR03-1: RvVAR031_21900
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Entry
RvVAR031_21900 CDS
T08810
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_21900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_21900
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
RvVAR031_21900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
BCH54580
LinkDB
All DBs
Position
1:2389733..2390731
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AA seq
332 aa
AA seq
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MRTLLVSTILAAGLYGMTGSAEAADCGSVSIAEMNWASAGVAANVDKIILESGYGCSVNL
VTGDTMPTFTSMNEKGEPDLAPELWVNTIQKPLAEAVKDGRLLKAARILKDGGVEGWWVP
KYITDEHPDIKTVQDALKHPELFPAPEDSSKGAVTNCPSGWACQVTTENIYRALKGDDAG
FQLVDSGSSAALDGSIANAIEKKQGWLGYYWAPTAILGKYDMVKLGMDTSFDKAEWDRCT
SVADCADPRVNDYPVTDVYSVVTKSFAEKAGVTMDYVGKRQWDNETIGKVLAWMSENQAD
NADAAEYFLKTYPDVWTQWVSPEVAEKVKAAL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaggacattgctcgtttccacgatactcgccgccggattgtatggcatgaccggttct
gccgaggctgccgattgcggttcggtctccattgcggaaatgaactgggcctcagccggc
gttgcggccaatgtcgacaagatcattctggaaagcggttatgggtgttccgtcaatttg
gtgactggcgacaccatgccaaccttcacctcgatgaatgaaaagggcgagccggatctg
gcccctgaactttgggtcaacacgattcaaaagccgctggcggaagccgtcaaggacggt
cgcctgctcaaagccgcacgcattctgaaggacggcggcgttgagggctggtgggtcccg
aaatacatcaccgacgagcatcccgatatcaagactgtccaggacgcactgaaacatccc
gagcttttcccagcgccggaagattcgtccaagggcgccgttaccaattgcccatccggt
tgggcctgtcaggtcaccaccgagaatatctacagggcgttgaagggtgacgacgcaggc
ttccagcttgtcgacagcggttcctctgccgcactggacggctctattgccaatgccatt
gaaaagaagcagggatggcttggctattactgggcaccgacagccattcttggcaaatac
gatatggtcaagcttggcatggataccagtttcgacaaggcggaatgggaccgctgcacc
tcggttgccgattgtgccgatccccgcgtcaacgattatccggtgacggatgtctatagc
gtcgttaccaagagctttgccgagaaggccggcgtgacgatggactatgtcggcaaacgc
cagtgggacaatgaaaccatcggtaaggtgctcgcctggatgagtgagaaccaggcggac
aatgccgatgcggccgaatacttcctgaagacataccctgatgtctggacgcagtgggtc
tcacccgaggtcgctgaaaaggtcaaggcagctctttaa
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