Agrobacterium vitis VAR03-1: RvVAR031_22410
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Entry
RvVAR031_22410 CDS
T08810
Symbol
cobN
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00860
Porphyrin metabolism
avf01100
Metabolic pathways
avf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAR031_22410 (cobN)
Enzymes [BR:
avf01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
RvVAR031_22410 (cobN)
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
BCH54631
LinkDB
All DBs
Position
1:complement(2444422..2448189)
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AA seq
1255 aa
AA seq
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MHLLLAQQGSISDGDDAIDLGQTPGDILFLSAADTELSAIAAALARQAETATWRLASLMA
LKHPMSVDTYIERTARHAKLIVVRALGGASYFHYALEALHACARRHAIKIAVLPGDDKPD
AGLEAFSNLDTSDLSALWAYLIEGGDSNASHFLSYAQALLTNATKPQEALPLLKAGLWWP
GRGAIDVPAWQALAGEGPIAALCFYRALVQSGETAPVEAMIEALQAQGLRVLPVFVASLK
DAVCVETLRMIFNQAAPDVVVNTTGFAVSVPGADAPSTVLDEQGAVVLQALFSSSPRSVW
DASMQGLSARDLAMNVALPEVDGRVLTRAVSFKSAARYDARVETTLVSHAPDPGRMAFVA
SLAANWARLRHIPAPERQVALIMANYPNRDGRLGNGVGLDTPAASLEVLKALKAEGYDTG
MLPASSDALMTTLMAGVTNAAVKGRVIRETLPLADYQRFFGSLPDKIRQEISDRWGEPQA
DPFFARDGFALPLLRFGKVMVGIQPARGYNIDPKDSYHSPDLVPPHGYFAFYAFLRQSFG
VHAIIHMGKHGNLEWLPGKALALSESCYPEAVLGPMPHLYPFIVNDPGEGTQAKRRASAV
IIDHLTPPLTRAESYGPLKDLEALVDEYYQAMGGDPRRVTLLKSQILDLVADIGLDEDAG
IAGGEAEEVKLTKLDAYLCDLKEMQIRDGLHIFGQAPEGRLLTDLVVALARVPRGQGQSQ
GGQGRDASLHRAIAMDALCGWADFDPLDCVFSDIWDGPQPDLLRNLTQAPWRTKGDTVER
IELLASDMVSGRLACPEDWQNTRAVLDEVEARLKPSVVKSGPAEIAGLLKGLSGRFVAPG
PSGAPTRGRPDVLPTGRNFYSVDSRAVPTPAAYQLGQKSAELLVARYVQDHGEWPVSFGI
TAWGTSNMRTGGDDIAQALALIGVKPLWDSASRRVTGYEIIPQAILGRPRVDVTLRISGF
FRDAFPEQIALFDKAVRAVGALDEDAADNPIAARIRAETVLFQQQGLDEKTASRRAGYRV
FGSKPGAYGAGLQALIDEKGWERRADLAEAYLVWGAYAYGAGEEGRAERGLFEERLQGVQ
AVVQNQDNREHDLLDSDDYYQFEGGMTAAVEQLSGRRPTVYHNDHSRPEKPVIRTLEEEI
GRVVRARVVNPKWIEGVMRHGYKGAFEIAATVDYLFAFAATTGAVRQPHFDAVYRAFIGD
DRVRAFMADKNPAALKDMSQRLLEAIERGLWTPRSNSARYHLSQILQTIQLENAL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttctgcttgctcagcaaggctcgatcagcgacggggatgacgcgatagacctt
ggccagacgccgggcgatatcctgtttctatccgctgccgataccgagctatccgctatc
gcggcggcgctggcgcggcaagccgagactgcgacatggcggctggccagcctgatggcg
ctgaaacatccgatgtcggtcgatacctatatcgagcgcacggcccgccatgcgaaactg
attgttgtcagggcgctgggtggggccagctattttcattatgcgctggaggcgctgcac
gcctgcgcccgccgacatgcgatcaaaattgccgttctacccggtgacgataagccggat
gccgggctggaggcgttttcaaacctggatacctcggatctatcggcgctttgggcctat
ctgattgagggcggcgatagcaatgccagccatttcctgtcctatgcgcaggcgctgctg
accaatgcaacaaagccgcaagaggctttgccgctgctgaaggccgggttgtggtggccg
gggcgaggggcgatcgacgttccggcgtggcaggcgcttgcaggcgaagggccgattgct
gcgctctgcttttaccgcgccctcgtgcagagcggagagaccgcgccggttgaggcgatg
atcgaggcgctgcaagcgcagggcctgcgggtcttgccggtgtttgttgccagtctgaaa
gatgccgtctgcgttgagaccctgcggatgatttttaaccaggccgcaccggatgtggtg
gtcaacacgacaggctttgctgtttccgttccgggtgccgacgcgccctcgaccgtgctg
gacgagcagggtgccgtggtattgcaggcgctgttttcctcgtcgccacgctctgtctgg
gacgcatcgatgcaagggctgagcgcccgtgatctcgccatgaatgttgcgctgccggag
gtggacgggcgggtgctgacccgagccgtgtccttcaaatccgctgcccgctacgatgcg
cgggtggaaaccacgctggtcagccatgcgccggacccgggccgcatggccttcgttgcc
agtctggccgccaattgggcgcggctgaggcacatacctgcgcctgaacggcaggttgcc
ctgatcatggccaattaccccaaccgggatggacgcctgggcaatggcgtcgggctggat
acgcctgctgccagccttgaagtgttgaaggccctgaaggccgaaggctatgacactggc
atgctgccagccagctctgatgcgctgatgacgacactgatggccggtgtcaccaatgcg
gcggtgaagggcagggtgatccgcgaaaccttgccgcttgccgattaccagcggtttttc
gggagcctccctgacaaaattaggcaggagatcagtgacagatggggagagccgcaggcc
gatccgttttttgcccgggatggtttcgcgctgccgctgctgcggttcggcaaggtgatg
gtcggcattcagccagcgcggggctataatatcgatccaaaggacagctatcattcgccg
gatctggtgccgccgcatggctatttcgccttttacgcatttttgcgccagtcatttggc
gttcacgccattattcatatgggcaagcacggtaatctggaatggttgccgggaaaggcg
ctggcgctgagcgagagctgttatcccgaagcggtgctggggccgatgccgcatctctat
ccctttatcgtcaacgatcccggtgaggggactcaggccaagcgccgggccagcgccgtg
attatcgatcacctgaccccgccgctgaccagggcggaaagctacggcccgctgaaggat
ctggaagcgctggtcgatgaatattaccaggcgatggggggcgatccacgccgggtcact
ctgttgaaatcccagatcctagatctggtcgccgatatcggtctggatgaggatgcaggc
attgccggtggtgaggcggaggaggtcaagctgaccaagctcgatgcctatctctgcgac
ctcaaggaaatgcagatccgcgatggcctccatattttcgggcaggcaccggaaggccgg
ttgctgaccgatctggtcgtggccttggcgcgggtgccgcgtggtcaagggcagagccaa
gggggccagggtcgcgatgctagtctgcaccgcgcgatcgccatggatgcgctgtgcggg
tgggccgattttgatcctctggactgtgtgttttctgatatctgggacgggccgcaaccc
gaccttctgagaaacctgacgcaagccccctggcgcaccaagggtgatacggtcgagcgg
atcgaattgctggcctcagacatggtgtcgggcaggcttgcctgtcccgaagactggcaa
aacacccgcgctgttctcgatgaggttgaagcccggctgaagccgagcgtggtcaaatcc
ggcccagcggaaattgccggactgctcaaaggactgtctggccgcttcgtcgctcccggc
ccgtccggtgcgccgacacgcggtcggccggatgtgctgccgaccggccgtaatttctac
tccgtcgatagccgcgccgtgccgacacccgccgcttaccaactcggccagaaatccgcc
gaactgctggttgcccgctatgtgcaggaccatggcgaatggccggtgtcttttggcatt
actgcctggggaaccagcaatatgcgcacgggcggcgatgatattgcccaggcgctggca
ctgattggcgtcaagccgctctgggacagcgcctcgcgccgggtgacgggctatgagatc
attccccaggcgattttaggtcgcccccgcgttgatgtgacactgcggatttcagggttt
ttccgcgatgcttttcctgagcagatcgccttgttcgacaaggcggtgcgggcggttggc
gccctggatgaggatgcggcggataatccgattgcggcgcgtatcagggccgaaacggtc
ttgttccagcaacaggggcttgacgaaaagaccgccagccgccgggcgggctaccgggta
ttcgggtcgaaacccggcgcttacggtgcgggcctgcaagccttgatcgatgaaaagggc
tgggagcgccgggccgatctggcggaggcctatctggtctggggtgcttacgcttacggc
gcgggcgaagaaggcagggccgagcgcggcctgttcgaagagcgcttgcagggcgtgcag
gccgtggtgcagaatcaggacaatcgcgagcatgatttgttggatagcgacgattactat
cagttcgagggcggcatgacggcggcggtcgagcagctttcgggtcgcaggccaaccgtc
tatcacaacgaccattcccgaccggaaaagcctgttatccgcacgctggaggaagagatt
ggccgggtggtgcgcgcccgcgtcgtcaatccgaaatggatcgagggcgtgatgcggcat
ggctataagggtgcgttcgaaattgccgcgacggtagattatctgtttgcctttgccgcc
accaccggtgccgtgcgccagccgcatttcgacgccgtttaccgggcttttattggcgat
gaccgggtgcgggctttcatggctgataaaaacccggctgcgctgaaggacatgtcgcag
cggctgttggaagccatcgagcgcggcctctggacgccgcgcagcaattcggcgagatat
catctatcccagattttacagacgatccaattggagaatgccctatga
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