Agrobacterium vitis VAR03-1: RvVAR031_22480
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Entry
RvVAR031_22480 CDS
T08810
Symbol
crtB
Name
(GenBank) phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00906
Carotenoid biosynthesis
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
RvVAR031_22480 (crtB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
avf01006
]
RvVAR031_22480 (crtB)
Enzymes [BR:
avf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
RvVAR031_22480 (crtB)
Prenyltransferases [BR:
avf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
RvVAR031_22480 (crtB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BCH54638
LinkDB
All DBs
Position
1:complement(2454367..2455230)
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AA seq
287 aa
AA seq
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MVESAKPSPLVPDVCLTTLREIDRDRYLACLLSPPEKQPALAALYAFNAELARVRDLVRE
PLPGEIRLQYWRDLLSGKGHGDTTANPLAAGLLAAVESYRLPVQPLLDMIDARIADLYDD
PIGPKSALEGYAGETASALIQLASLVLDAGAALNCATIAGHAGVAQAIAGLLALMPQHRA
RGQLYIPDEILTATGLDRDAFLSGKDEMRIDGAIEAFAGLGLDHLAKARAGGKLPASLVA
AYLPVALAGPILRDARRRGADILQTPIRRAQWRRQLTLLRASMTGRF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaagtgcaaagccatcgccattggtcccggatgtctgccttacgacgctgcgg
gagatcgaccgtgaccggtatttggcctgccttctctccccgccggaaaagcagcccgcc
ttggcagcgctctatgccttcaatgccgagcttgcccgggtgcgcgatctggtgcgcgaa
cccttaccgggcgaaatccggctgcaatattggcgcgacttgctttcgggcaaggggcat
ggcgataccacggccaatccactggcggcagggcttttggcggcggtggaatcctatcgt
ttaccggttcagcccttgctcgacatgatcgatgcgcggattgccgatctttatgacgat
ccgatcgggccgaaatcggcgctggaaggctatgcgggagaaaccgcgtcggcgctgatc
cagctggcgagcctggtgctggatgccggggccgcgctgaattgcgcaaccatcgccgga
catgccggggttgcccaggccattgccggactattggcgctgatgccgcaacatcgggcg
cggggacagctttacattcccgacgagatattgactgcgaccggtctcgaccgcgatgcc
ttcctgtcgggcaaggacgagatgaggatcgacggtgccatcgaagccttcgccggtttg
gggctcgatcatcttgccaaggcgcgggctggcggcaagcttcctgcctctttggttgcg
gcctatctgccggtggcgctcgccggtccgattctgagggatgctcgtcggcgcggtgcc
gatattctgcaaacgccgatccgccgagctcagtggcgccgacagctgacactgctgcgc
gccagcatgacgggtcgattttag
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