Agrobacterium vitis VAR03-1: RvVAR031_22700
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Entry
RvVAR031_22700 CDS
T08810
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RvVAR031_22700 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
avf01007
]
RvVAR031_22700 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avf03016
]
RvVAR031_22700 (valS)
Enzymes [BR:
avf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RvVAR031_22700 (valS)
Amino acid related enzymes [BR:
avf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RvVAR031_22700 (valS)
Transfer RNA biogenesis [BR:
avf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RvVAR031_22700 (valS)
Prokaryotic type
RvVAR031_22700 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
BCH54660
LinkDB
All DBs
Position
1:complement(2480128..2482986)
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AA seq
952 aa
AA seq
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MSGQNMLDKTYDSASVEPKIAKAWDEAEAFRAGVNAKPGAESFTIVIPPPNVTGSLHMGH
ALNNTLQDIMIRFERMRGKDVLWQPGMDHAGIATQMVVERQLMEKQLPGRREMGRDAFID
KVWEWKDESGGLIFNQLKRLGASCDWSRERFTMDEGLSEAVLEVFVTLYKQGLIYKDKRL
VNWDPKLLTAISDLEVEQHEVNGNLWHLRYPLEEGVTYQHPVAFDEDGKATEWETRDYLV
VATTRPETMLGDTGIAVHPDDERYQSIIGKHVILPIVGRRIPIVGDEYPDPTAGTGAVKM
TPAHDFNDFDVGKRAGLRMINILNIDATVTIVENDDFLEGLRPSREQQMVWAELEGQDRF
FVRKKIVEIFEAEGLLDKIEPHKHTVPHGDRGGVPIEPRLTEQWYVDAKTLAKPAIDSVR
EGRTKFVPKNWDKTYYEWMENIQPWCVSRQLWWGHQIPAWYGPDGQVFVEKDEETALHAA
IQHYLSHEGPMKAFVEDKIENFKPGEILTRDEDVLDTWFSSALWPFSTLGWPEKTPEVAR
YYPTNVLVTGFDIIFFWVARMMMMSLHFMKDEAGNPVEPFETVYVHALVRDKNGQKMSKS
KGNVINPLELIDEYGADALRFTLTIMAAQGRDVKLDTARVAGYRNFGTKLWNATRFAEMN
GVKSDPSFLPEATTLAINRWILTELTRAEREVTEAIAHFRFNDAASALYRFVWNQFCDWY
LELLKPVFAGEDEVAKTEAQACAAYVLEQTYKLLHPFMPFMTEELWAHTAGEGVERETLL
CHADWPALTFSDEQAAADINWLVDLVSGIRSARAEMNVPPSAVAPLTVVGANGVTRSRLE
HHEAAIKRLARVGEISHAPEAPKGSAQVIVGEATACLPLGSLIDLGAERARLEKSIGKVD
QDIEKGRKKLGNEKFVANADPDVVAAERQRLAELEEQRGVLAVALQRVNEAG
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcagaacatgctcgataagacctatgattccgcaagcgtagaaccgaaaatc
gccaaggcctgggatgaggcggaggcattccgcgccggtgtcaatgccaaaccgggtgcg
gaaagcttcaccatcgttatcccgccgccgaatgtgaccgggtcgctgcatatgggccac
gcgctcaacaataccttgcaggacatcatgatccgcttcgagcggatgcgcggcaaggat
gtgttgtggcagccgggcatggaccatgccggcattgcaacgcagatggttgtcgagcgg
cagttgatggaaaagcagctgccgggccgtcgcgagatgggccgtgatgcgtttatcgac
aaggtctgggagtggaaggacgaatcgggcgggttgatcttcaaccagttgaagcggctt
ggcgcatcctgcgattggtcgcgcgagcgtttcactatggacgagggcctgtccgaggcg
gttctggaagtctttgtcaccctctacaagcaggggctgatctacaaggacaagcgcctc
gtcaattgggaccccaagctgttgacggcgatttccgatctggaagtcgagcagcatgag
gtcaatggcaacctctggcacctgcgctatccgctggaagagggcgtgacctaccagcat
cctgttgccttcgatgaagacggcaaggcgacggaatgggagacccgcgactatctcgtg
gtcgcgacaacccgtccagaaaccatgctgggcgataccggcattgccgttcatcccgat
gatgagcgctatcagtcgatcattggcaagcatgtaatcctgccgatcgttggccgtaga
atccctattgtcggtgacgaatatcccgatccgacggctggcaccggcgctgtaaaaatg
acgcccgcccatgatttcaacgactttgatgttggcaagcgcgcgggtctgaggatgatc
aacatcctcaatatcgatgcgacggtgaccattgtcgagaatgacgattttctggaaggg
ctgaggccgagccgtgaacagcagatggtctgggccgagctggaaggccaggaccggttc
ttcgtccgcaagaagatcgtcgagatcttcgaggcggaagggctgctcgacaagatcgag
ccgcataaacatacggtgccgcatggcgaccgaggcggcgtgccgatcgagccgcgcctg
accgagcaatggtatgtggacgccaaaacgctggccaagcccgccatcgacagcgtgcgc
gagggccgcaccaaatttgtgccgaagaattgggacaagacctattacgaatggatggag
aatatccagccctggtgcgtgtcacgtcagctttggtggggacaccagattccggcctgg
tatggtccggatggtcaggtcttcgtcgaaaaggacgaggaaacggcgcttcacgctgcc
attcaacattatctgtcgcatgaagggccgatgaaggctttcgtggaagacaagatcgag
aactttaaaccgggcgagatcctcacccgtgacgaagacgtgctcgatacctggttttcc
tcggcgctctggccgttctccacgcttggctggccggaaaaaacaccggaagtggcgcgc
tactatccgaccaatgtcctcgtgaccggttttgacatcatcttcttctgggttgcccgg
atgatgatgatgagcctgcatttcatgaaggatgaagcgggcaatcccgtcgaaccattt
gaaaccgtttatgtccatgcgctggtgcgcgacaagaacggtcaaaaaatgtcgaaatcc
aagggtaatgtcatcaatccgctggagttgatcgatgaatatggcgctgatgcgttgcgc
ttcacgctaaccatcatggctgcccagggtcgtgatgtgaaactcgatacggctcgggtt
gcgggctatcgcaatttcgggaccaagctgtggaacgccacccgttttgctgagatgaac
ggtgtgaagtccgatccgtccttcctgcccgaggcaacaacactggctatcaaccggtgg
attctgacggagctgacgcgggctgaacgcgaggtcacggaggccatcgcgcatttccga
ttcaatgatgcggccagcgcgctttatcgcttcgtctggaaccagttctgcgactggtat
ctggaactgctgaagccggtctttgccggtgaagacgaagttgccaagactgaagcccag
gcttgcgctgcctatgtgctggagcagacctataagctgctgcatcccttcatgccgttc
atgacggaagaattgtgggcgcatacggcaggcgagggcgtcgagcgtgaaacgctgctg
tgccatgccgactggccggctctgaccttcagcgatgagcaggcggctgccgatatcaac
tggttggtggatctggtcagcggcattcgctcggcccgggcggaaatgaatgtgccgcct
tccgccgtcgcaccgctcaccgtcgttggtgccaacggcgtgacccgctccaggctggag
catcacgaagccgccatcaagcggctggcgcgggtgggtgagatcagccacgcaccggaa
gccccgaagggctcggcccaggtgatcgtcggtgaggcaacggcttgcctgccgctcggc
agtctgatcgatcttggtgctgaacgcgcccgtctggagaagtccatcggcaaggtcgat
caggatatcgagaagggccgcaagaagctcggcaacgagaaatttgtcgccaatgccgat
ccagatgtcgtcgccgccgagcgtcagcggcttgccgaactggaggagcagcgcggcgtg
ctggctgtggccctgcaacgggtcaacgaggcgggttga
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