Agrobacterium vitis VAR03-1: RvVAR031_24240
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Entry
RvVAR031_24240 CDS
T08810
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00300
Lysine biosynthesis
avf00550
Peptidoglycan biosynthesis
avf01100
Metabolic pathways
avf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RvVAR031_24240 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RvVAR031_24240 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RvVAR031_24240 (murF)
Enzymes [BR:
avf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RvVAR031_24240 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
TilS_C
Motif
Other DBs
NCBI-ProteinID:
BCH54814
LinkDB
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Position
1:complement(2640341..2641774)
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AA seq
477 aa
AA seq
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MTLLWTIEDLVAAMTGRPVGTMPAGITGISIDSRSIQPGEAFFAIKGDRVDGHDYASIAV
ANGAALMVVNEAKLPALGRLTVPMIVVDDVLQALGRLAIAARARSRARIVAVTGSVGKTT
TKEMLRQVLAPSGEVHAAVASFNNHWGVPLTLARMPATAQFGVFEIGMNHSGEITPLVQM
VRPHLAVITTIAPAHLGNFASVDEIADAKAEIFSGVAANGGVLLNHDNPYFEYLEHKAQE
AGITHIHSFGQHAKAEFRLAEFDGAAESSTAWAIIDGETREVVIAAPGRHIAENAMAALG
AARLLGADLDGAVDALSRLSPVKGRGERHRLRCASGPFTLIDESYNANPASMRAAIAVLA
AAQPRGEGRRIAVLGDMLEMGEFSEELHGDLAGPLLAAGIEHVWLAGPAMAALRAQLPET
VSVASFNTAEDLAAFAVASVHGGDVVMVKSSLGIGFGKIVAALLDNYPPLDDTRRPE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgaccttgctctggaccatcgaagacctggttgcggccatgaccggacgaccggttggc
actatgccagcgggcattaccggcatttctatcgacagccgcagcatccagcccggagaa
gcctttttcgccatcaagggtgacagggtggacgggcatgattatgccagcattgccgtg
gcgaatggcgcggcgctgatggtggttaacgaggcaaagctgcccgcgcttggccggttg
accgtgccgatgatcgtcgttgatgatgtgttgcaggcgctgggaaggctggccatcgcg
gcccgcgctcgctcaagggcaaggatcgttgctgtgaccggttcggtcggcaagacgacc
accaaggaaatgctacgccaggtgcttgcaccgtcaggtgaagtgcatgctgccgtcgcc
tccttcaataatcactggggcgtgccgctgacattggcgcggatgcccgccactgcgcaa
ttcggtgtgtttgagatcggcatgaatcattccggcgaaatcaccccgctggtgcagatg
gtccgcccgcatctggctgttatcaccaccattgcgcctgcccatcttggcaattttgcc
agtgtcgatgagatcgccgatgccaaggcggaaatcttttccggtgtcgctgccaatggc
ggcgtgctgttgaaccacgacaatccctatttcgaatatctggaacacaaggcacaggaa
gcgggtatcacccacatccattccttcggccagcatgccaaggcggaattccggctggca
gaatttgatggtgctgccgaaagctccaccgcctgggccattatcgatggcgagacccgt
gaagtggtgatcgctgcgccgggccgccacatcgctgaaaacgccatggcggcgctgggc
gcagcccggcttctgggggccgatctggatggtgcggtcgatgcattgagcagactgtcg
ccggtcaagggccggggtgagcgccaccgactgcgctgcgcctctggtcctttcacactg
atcgacgaaagctataatgccaaccccgcctccatgcgtgccgccattgcggtgctggcc
gcagcccagccgcgcggcgagggccgccgcatcgcggtgctcggtgacatgctggaaatg
ggtgagttttccgaggaattgcacggagatctggcagggccgttgctggccgccgggatc
gagcatgtctggctggccggaccggccatggcggcgttgcgggcgcaattgccggagacc
gtttccgttgcgtctttcaacaccgctgaagatctggccgcttttgcggttgcgtcggtt
cacggtggcgatgtggtgatggtcaagtcgtcgcttggcatcggttttggcaagattgtc
gcggctttgcttgacaactatccccctttggacgacacccgccgcccagaatag
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