Agrobacterium vitis VAR03-1: RvVAR031_24800
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Entry
RvVAR031_24800 CDS
T08810
Name
(GenBank) GntR family transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
Cys_Met_Meta_PP
HTH_36
Rrf2
HTH_41
MarR
Beta_elim_lyase
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BCH54870
LinkDB
All DBs
Position
1:complement(2706955..2708310)
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AA seq
451 aa
AA seq
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MAAIRTRISSRSLATGARLPSVRGFAKTMQVSVSTVVEAYERLAAEGLIRSRPGSGFFVA
APLAPLSLTNLGPRLEREIDPFWVSRQSLETRGDMLKPGCGWLPPDWLPQAALRRAMRIL
GRADGAVLTDYGSPLGLPGLRQLLSRRMADHGLTVAADAIMLTESGTHAIDLVCRFFLEP
GDCVLVDDPCYFNFHALLRAHRANIGSVPYLADGPDLAAFAAIVEAHKPRLYITNSGVHN
PTGASLSAVNAHRLLTLADRADLTIVEDDIFADFEDVASARLSAFDGLNRVVQIGSFSKT
LSASVRCGYIAARRDWIEGLTDLKIATSFGGGRLSAELVLAVLTDGGYRKHLEGLKTRLA
GARSTVAAELSSLGFTPWLQPKAGLFLWCRMPDGIDSGALARHCLKDGVILAPGNVFSLS
QNAGRFMRFNVAQTMDARVFGSLKAGLQQLR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcagctattcggacgcgcatttcctcccgaagcctggcgacgggcgcgcgactgccc
tctgtgcgcggctttgccaagaccatgcaggtttcagtttccaccgtggtggaggcttac
gaacggttggcggcggaagggctgatccgctcgcggccgggctccgggtttttcgtggcg
gctccgttggctcctctgtccttgaccaatctcgggcctcggctggagcgggagatcgat
cctttctgggtctctcgccaatcgctggaaacccgtggcgatatgctgaaaccgggatgt
ggctggctgccgccggattggttgccgcaggcagctcttcgccgcgccatgcgtatcctt
ggccgtgccgatggtgcggtgttgactgattacggttcgccgctgggcctgccagggctt
cggcaattgctatcgcggcggatggccgatcatgggctgacggttgcggcggacgcgatc
atgctgacggaatcggggacccatgccatcgatctggtctgccggttttttctggagccg
ggcgattgcgttctggtcgatgatccctgctatttcaactttcatgccttgctgcgggcg
caccgcgccaatatcggcagtgtgccttatcttgcggatgggccggatttggccgcgttc
gcagccattgtcgaggcgcataagccgcggctctatattaccaattcgggcgtgcataat
cccaccggcgcaagcctttcggcggtcaatgcccatcggctgctcacccttgccgaccgc
gccgacctgaccatcgtcgaggacgatattttcgccgatttcgaagatgtcgcgtctgcg
cggctgtcggccttcgatggtttgaacagggtggtgcagatcggcagtttttccaagaca
ttgtcggcttcggtgcgctgcggttatatcgccgcccggcgcgactggatcgagggcctg
accgacttgaagatcgccacgagttttggtggcgggcggctttccgccgagctggtgttg
gccgtgctgacggatggcggctatcgcaaacatcttgaagggctgaaaactcggctggcc
ggagcgcgtagcactgtggctgcggagttgtcgtcgcttggcttcacgccctggctccag
ccgaaggcgggactttttctgtggtgtcgaatgcctgacgggatcgactcaggcgctctg
gcccgccattgcctgaaggatggcgtcatcctggcacccggcaatgtcttcagcctgtcg
cagaatgcgggccggttcatgcggtttaatgtggcacaaaccatggatgcgagggttttt
ggctcattgaaggcgggtttacagcaattgcgatga
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