Agrobacterium vitis VAR03-1: RvVAR031_25710
Help
Entry
RvVAR031_25710 CDS
T08810
Name
(GenBank) diguanylate cyclase
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
HAMP
PAS
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-ProteinID:
BCH54961
LinkDB
All DBs
Position
1:2806737..2809139
Genome browser
AA seq
800 aa
AA seq
DB search
MTRSVEQRFLALVAGTVFVCVVPLFLLFLWLSSQRAETDQQNSIAVLLAANAQALAKPLW
DFDAESVRQISAALVSGGEVIRVEVSDPTGNIRIDMPQTFAPAKTFSSLSQTIIYQHQDG
PKTVGTITLSFQKHGLFASIRRTEGVFIAIFILSMLVVILAAIVGNRMMVMKPLTQLTAA
IEATRRLGSRRSVDWHSNDEMGRLAQSFNAMQSKLQQEEIDLKQAHRLATDIYHATPAML
FSVDADDRITDISDYWTSVTGYHREDIIGLNFESLITIEARQAYRQVKRDNETGLQQQYT
TKFVCADGRIMDVLVVESGNATPMAQSNLSLSVMTDITALKQSEARNRRQAMTDHLTGLL
NRQGFENELDVQIEATDRQGGSLACLFVDLDRFKWINDNLGHHAGDTTLKILVDMIVYLL
PENSVAARIGGDEFAILLRADDCEAAARAMANDICGIFETPFIVKGTATRLSASIGIALY
PQHAETATELLQKADMAMYNRKRDGKNGFQIFDDSIGNTTRRRAEIEQMIEQALSNDWLD
AFLQPIIDLQSGKTVGYEALMRLRHPVHGIMAPTEIISLAEETGTIHDIGKQVFDKALDH
FTRLSALSGDTTSYLALNVSPTQIDASLLVWLASAVHLFNIDPSRIIIEITEATLLHDSP
HIQTVLQKIGDFGCRIALDDFGTGYSSLSYLSRFPVNIIKIDQSFIRSMTGDTPDLRERS
RMLIEGIAAISHKMKCTVVAEGIETKEQWRALQAIGVDYGQGYLFDRPLSFEDLQARFGA
NGTTPPKATPIARIGQRTTG
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgactcggtccgtggaacagcgtttccttgcgctggtggctggaacagtgttcgtctgt
gtggtgccgctgtttctgctgtttctctggctgtcgtcacaacgtgccgaaaccgatcag
caaaatagtatagctgtcctgttggctgccaacgcccaggcactcgccaagccactttgg
gatttcgatgctgagagtgtacgccagatcagtgcagcgctggtctccggtggcgaggtc
atcagggtcgaggtttccgacccgaccggcaatatccgcattgacatgcctcaaacattt
gcgccggcaaagacattttcctccctgtcgcaaaccatcatctaccagcatcaggacgga
ccaaaaaccgttggcaccattacgctttcctttcaaaagcatggcctgtttgccagcatt
cgccggaccgaaggcgtgtttatcgccatcttcatcctgtctatgctggtggtgattctg
gccgccatcgtcggcaaccgtatgatggtgatgaagccgctgacacagttgaccgccgcc
atcgaagccacgcgcaggctggggtcccgccgttcggtcgactggcattccaatgacgaa
atgggacggttggcgcaaagcttcaacgccatgcaatccaagctccagcaggaagaaatc
gatctgaaacaggcgcaccgcctggcaaccgacatctaccatgccacgcccgccatgctg
ttttccgtcgatgccgatgaccgcattaccgacatcagcgactactggacatcagtgaca
ggctatcaccgcgaagatatcattggtctcaatttcgaaagcctgatcacaatcgaggcc
cgtcaagcctaccggcaagtcaagcgggataacgaaaccggcctgcaacagcaatatacc
accaaattcgtctgcgccgacggacggatcatggatgtgctggtcgtcgaatccggcaat
gccacaccgatggcgcagtccaacctttcgctgagcgtcatgactgacatcaccgccctc
aaacaatcggaggcacgcaaccggcgccaggcaatgaccgatcatctgaccgggcttctc
aaccgccaaggtttcgagaacgaactggatgtgcagatcgaggcaaccgaccgccagggc
ggttcccttgcatgcctgttcgtcgatctcgaccggttcaaatggatcaatgacaatctc
ggccatcatgccggtgacacaaccctgaaaattctggtggacatgatcgtctatctgctg
ccggaaaactcggtggccgcccgcatcggcggcgacgaattcgccattctgctgcgtgcc
gacgattgcgaggccgctgcccgcgccatggccaatgatatttgcggaattttcgaaacc
cccttcatcgtcaaggggaccgctacaaggctgagtgccagcatcggcatcgcgctttat
ccacaacacgccgaaaccgcgacggaactgctgcaaaaggccgatatggccatgtataat
cgcaagcgcgacggaaagaacggtttccagatcttcgacgatagcatcggcaacaccacc
cgccggcgcgccgaaatcgagcagatgatcgagcaggcattgagtaacgactggctggat
gctttcttgcagccgatcatcgacctgcaaagcggcaaaacggtcggctacgaggccctg
atgcgcctgcgccatcccgtccatggcattatggcaccgaccgaaatcatcagcctggcc
gaggaaaccggcaccattcacgatattggcaagcaggttttcgataaggctctcgatcac
ttcacccggctttccgccctcagtggcgacactacctcctatctggcgctgaatgtctca
cccacgcagatcgatgccagcctgctggtctggctggccagcgccgtgcatcttttcaac
atagacccgtcgcggatcatcattgagatcaccgaagcgacgttgctgcacgacagcccg
catatccagaccgtcctccaaaaaatcggcgattttggttgccgcattgcgctggacgat
ttcggcaccggctattcctcgctcagctatctcagccgcttcccggtcaatatcatcaag
atcgaccaatccttcatccgctccatgaccggcgacaccccggatctgcgcgagcgcagc
cgcatgttgatcgaaggcattgccgctatttcacacaagatgaaatgcaccgtggtggcc
gagggcatcgagaccaaggaacaatggcgcgcgctacaggcgatcggtgtggattatggc
cagggctatctgttcgatcgccccttgtcctttgaagatctgcaagcccgtttcggggcc
aatggcacgacgccgccgaaagccacgcccatcgccaggattggacagcggacaacgggg
tag
DBGET
integrated database retrieval system
