Agrobacterium vitis VAR03-1: RvVAR031_25890
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Entry
RvVAR031_25890 CDS
T08810
Symbol
cheD_4
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_25890 (cheD_4)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_25890 (cheD_4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_25890 (cheD_4)
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_25890 (cheD_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_9
PAS_4
PAS_3
PAS
Laminin_II
PAS_8
ALIX_LYPXL_bnd
CbiA
DUF948
Noelin-1
Spore_YpjB
CENPH
Motif
Other DBs
NCBI-ProteinID:
BCH54979
LinkDB
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Position
1:2825751..2827448
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AA seq
565 aa
AA seq
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MTFRNLLQANKLAEDINAISTSQAMIWFSPDGRVLEANENFCKALHYSLEEIVGKHHRMF
CEDAIRNSPSYETFWKELASGKFQSGQFRRQTKEQTDIWIQASYNPVFHNGKVVRILKIA
TDISKTRIAALDDENRIRAIDQSQAIIEFEPDGTIFKANQNFLDAMGYSFAEIEGKHHRL
FCDPEYTRTADYDNFWVRLRAGEFIADNFVRYGKGGKRVWIQAAYTPVFNSRGKVYKVIK
VATDITSRMDAVDRIGDAISALANGDLTVAVTDHIDPALMKTRDDFNQAARSLEKTVAAI
RHSAELLADNAKVIGAVSNDIAKNAESQAASVEETAAALDTITATVQDSASRATGASTLV
TKTREHAKASGLIVNDATDAMNQIEGSSKEISNIIGVIDEIAFQTNLLALNAGVEAARAG
EAGKGFAVVAQEVRELAQRSAGAAKHIKDLIATSTASVQRGVGLVFKTGSALTEISEQVQ
EIDHHVQAISQATGEQLQGIKEINAAVTIVDQSTQRNTSTVEEASAAAQELASEAEKLRD
LIGGFKISGTTSLMTGRAVSSRRVA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcgtaatttgctacaggccaacaagctggccgaagacatcaatgctatctcg
acatctcaggcaatgatctggttctcgccggacggcagggtactcgaagccaacgaaaac
ttttgcaaggcgctgcattattcgttggaagagattgtcggaaaacatcatcggatgttt
tgcgaggacgcgatccgcaactcgccatcctatgagaccttctggaaggaactcgccagc
ggcaagtttcagagcggacagtttcgtcgccagaccaaggaacagaccgacatctggatt
caggcaagctacaaccctgtttttcacaatgggaaagtcgtccgaattctcaagattgca
acggatatcagcaaaacgcggattgcagctcttgatgacgaaaaccgcattcgcgccatc
gaccaatcgcaagcgatcatcgaattcgagcctgatggaaccattttcaaagccaatcag
aattttctcgatgccatgggctatagtttcgccgagattgagggcaagcaccacaggctt
ttctgcgatcccgaatacaccaggacagctgactacgataatttctgggtgaggctgcgt
gctggcgaattcatcgccgacaacttcgttcgctatggcaaaggcggcaagcgtgtctgg
attcaggcagcctatacgccagtgttcaattcccgtggcaaggtctacaaagtcatcaaa
gtcgcgactgacataacctctcgaatggacgccgtcgatcggatcggtgatgccatcagc
gcgcttgcgaatggcgatctcacggtcgcagtgacggatcacatcgatccagctttgatg
aagacacgcgatgatttcaaccaggcggcccgttcgctagagaagactgtggccgcgatt
aggcattcggcggagttgctggctgataatgcgaaggtcattggcgccgtctccaacgac
attgccaaaaatgccgagagccaggccgcttcggtggaagaaaccgctgcggcgctcgac
accatcaccgccacggttcaggactccgcgtctcgcgcgacgggagccagcaccctggtc
accaaaacccgcgaacacgcgaaagcctccggactgatcgtcaatgacgcgacggatgcg
atgaaccagatcgagggatcatcaaaagaaatctccaatatcatcggcgtcatcgacgag
attgccttccagacaaacttgctcgcattgaatgccggtgtggaagccgcacgtgccggt
gaagccggcaagggctttgctgtcgttgcccaggaagtgcgcgaactcgcgcaacgctcc
gccggcgcggcaaaacatatcaaggacctcatcgccacctcaaccgcatcggttcagcgc
ggtgtcggccttgtcttcaagaccggttctgccctgactgaaatttcggagcaggtccag
gaaatcgaccatcatgtccaggcgatttcccaggcgacgggcgagcaattgcagggcatc
aaggaaatcaacgccgcagtcaccattgtcgatcaaagcacacaacgaaatacgtccacg
gttgaagaagccagtgccgcagcacaggagcttgcatccgaggccgaaaagctgcgcgat
ctgatcggagggttcaagatatcgggaacgacaagcctcatgacgggccgcgcagtgtct
tcgagaagagtggcctga
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