Agrobacterium vitis VAR03-1: RvVAR031_26180
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Entry
RvVAR031_26180 CDS
T08810
Name
(GenBank) AsnC family transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR_2
HTH_IclR
HTH_11
MarR
HTH_Crp_2
HTH_23
HTH_29
HTH_20
TrmB
NirdL-like_HTH
DprA_WH
HTH_Mga
HTH_36
GntR
HTH_30
HTH_Tnp_ISL3
HTH_38
LexA_DNA_bind
Fe_dep_repress
HTH_50
HTH_PafC
HTH_41
DUF4423
HTH_28
HTH_8
wHTH-PRTase_assc
Sigma70_r4_2
HTH_7
HTH_5
HTH_27
HTH_10
NapD
SelB-wing_3
EAP30
Phage_GPA
AsnC_trans_reg2
Motif
Other DBs
NCBI-ProteinID:
BCH55008
LinkDB
All DBs
Position
1:complement(2855627..2856058)
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AA seq
143 aa
AA seq
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MQVSDKDRELLALLGENARMPVATLARRLGLSRTTVQARLERLEREGVIAGYGLRLSDAY
QSGLIRAHVMITMAPKALSSVTAELAVIQQVTALHSVNGPYDLIAMLAAPSILELDRLID
RIGELSGVERTLSSIILSTRIAR
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctccgataaggaccgtgaattgctggcgctgttgggcgaaaacgcccgcatg
ccggtggcgacgctggcgcgacggcttggcctgtcgcgcaccacggtgcaggcgcggctg
gaacggctggagcgggaaggggtgattgccggctacgggcttcggctatcggacgcctat
cagagcgggctgatccgcgcccatgtgatgattaccatggcacccaaggccctctccagc
gtcacggcagaactggccgtcatccagcaggtgacggcgctgcattctgtcaacggtccc
tatgacctgatcgccatgctggcagcgccctcaatcctggagctggaccggctgattgac
cggattggggagctgtcgggggtggagcggacgctgtcgtcgatcatcctatcgacgcgg
atcgctcggtaa
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