Agrobacterium vitis VAR03-1: RvVAR031_26500
Help
Entry
RvVAR031_26500 CDS
T08810
Symbol
braC
Name
(GenBank) branched chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_26500 (braC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_26500 (braC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_26500 (braC)
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RvVAR031_26500 (braC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
LppC
Ins_allergen_rp
Motif
Other DBs
NCBI-ProteinID:
BCH55040
LinkDB
All DBs
Position
1:2891854..2892960
Genome browser
AA seq
368 aa
AA seq
DB search
MKLHLLASAALAALLAAAPAAHADITIGLMAPLTGPLAAIGAQIKNGTETAIADINAKGG
IKGEKLVLKTADDAGEPKQGVSAANQLVGEGVRFVVGPVTSGVAVPASDVLAENGALMVT
PTATAPSLTKRGLPTVLRTCGRDDQQADVAAKYVLAHFKDKKIAILNDKGQYGKGLADAF
KAALNADGVKEVFNDSLTAGEKDFSALVTRLKSANVDVLYFGGYHPEAGLLVRQMKDAGL
KAVVVAGDGLSNSEYTTVGGDAANGTLFTNAADALKNPDSKVAADSLTAKGIPAEAFTLN
AYAAVQVIAAGIEKVGSAEDAEAVATAIKSGDPIPTAIGKLTYGETGDLTSQSFSMYKWE
GGKTVAAE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcatcttttggccagcgcagcgcttgccgcgcttctcgccgctgccccggcc
gcccatgccgacatcaccatcggtctgatggcgccgctgaccggaccgttggcggccatt
ggcgcgcaaatcaagaatggcacggagacggcgattgccgatatcaatgccaagggtggc
atcaagggcgaaaagctggtgctgaagaccgctgacgatgcgggcgagccgaagcaaggc
gtgtccgctgccaaccagttggttggcgaaggcgtgcgtttcgtagtcggcccggtgaca
tcaggcgtcgccgttccggcctccgacgtgctggcggaaaacggcgcgttgatggtcacg
ccgaccgccacggccccaagcctgaccaagcgcggcttgccaaccgtgctgcgcacctgc
ggtcgtgatgatcagcaggccgatgtggcggccaaatatgtgctggcccatttcaaggac
aagaagatcgccatcctcaacgacaagggccagtatggtaagggtctggcggatgccttc
aaggccgcgctgaacgccgatggcgtcaaggaagtgttcaacgattcgctgaccgcaggc
gaaaaggatttcagcgcgctcgtcacccggttgaagtcggccaatgtcgacgtgctgtat
tttggcggctatcatcccgaagcaggcctgctggtgcgccagatgaaggatgccgggctg
aaagccgtggtggtggcgggcgatggcctgtccaacagcgaatataccactgtcggcggt
gacgccgccaatggcacgctgttcaccaatgccgccgacgcgctgaaaaacccggattcc
aaggttgcagccgattcgctgaccgccaagggcattccggcggaagccttcacgctcaac
gcctacgccgccgtgcaggtcattgccgctggcatcgaaaaggtcggcagtgccgaggat
gccgaggccgtcgccaccgcgatcaaatccggcgacccgatcccgaccgccattggcaag
ctgacgtatggcgaaaccggcgacctcacctcgcagagcttctccatgtacaaatgggaa
ggcggcaaaaccgtcgccgctgaataa
DBGET
integrated database retrieval system
