Agrobacterium vitis VAR03-1: RvVAR031_26580
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Entry
RvVAR031_26580 CDS
T08810
Symbol
der
Name
(GenBank) GTPase Der
KO
K03977
GTPase
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avf03009
]
RvVAR031_26580 (der)
Ribosome biogenesis [BR:
avf03009
]
Prokaryotic type
GTPases
RvVAR031_26580 (der)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
Ras
Roc
RsgA_GTPase
Arf
AAA_22
ABC_tran
AAA_24
AAA_18
Septin
TniB
Motif
Other DBs
NCBI-ProteinID:
BCH55048
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All DBs
Position
1:complement(2899893..2901317)
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AA seq
474 aa
AA seq
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MSFTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGEAKLVDLRFHIVDTAGL
EEAGADTLEGRMRAQTEIAIDEADLSLFVVDAKMGLTHVDKALADMLRKRGKPVVLVANK
SEARGSDGGFYDAFTLGLGEPVPISAEHGQGMIDLRDAIVEAIGVERAFPEDDDDVAETD
IVLRPTVEGEDDDEDLAYDDTKPLRVAIVGRPNAGKSTLINRFLGEDRLLTGPEAGITRD
SISVEWDWRGRTIKMFDTAGMRRKARVIEKLEKLSVADTLRAIRFAETVVIVFDATIPFE
KQDIQIVDLVLREGRAAVLAFNKWDLVEDPQAVLAELREKTERLLPQARGIRAVPMAGQT
GYGLEKLMQSIIDTDMVWNKRISTAKLNRWLDSVQTQHPPPAVSGRRLKLKYMTQVKARP
PAFMISCTRPDSVPESYIRYLTNGLRADFNMPGVPIRIHLKASENPFENKRKRR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaccgtcgccatcgtcggacgtcccaatgtcggcaaatccaccttgttcaac
cgtctggttggcaaaaagctggcgcttgtcgatgacacgccgggcgtgacccgcgaccgg
cggcccggtgaggccaagctggtggacctgcgcttccacatcgtcgataccgccggtctg
gaagaggctggtgccgacacgctggaaggccggatgcgcgcccagaccgaaatcgccatc
gacgaggccgacctgtcgctgttcgtggtcgatgcgaaaatgggcctgacccatgtggac
aaggcgctggccgatatgctgcgcaagcgcggcaagccggtggtgctggtggccaacaag
tcagaagcccgtggttcagatggaggcttctacgacgccttcacgcttggccttggcgaa
ccggtgccgatttccgccgaacacggtcaggggatgatcgacctgcgcgacgccattgtc
gaggctatcggcgtggaacgcgcctttcccgaagacgatgacgacgtggccgagaccgat
atcgtcctcaggcccaccgtcgagggtgaggatgatgatgaagatctggcctatgacgat
accaagccgctgcgcgttgccattgtcggacgcccgaatgccggaaaatcaacgctgatc
aatcgcttcctcggtgaggaccggttgctgaccggcccggaagccggaattacccgcgat
tcgatttcggtcgaatgggattggcgtggccgcaccatcaagatgttcgacacagcgggc
atgcgccgcaaggcgcgagtaatcgagaagctggaaaagctgtcggtggccgatacgttg
cgcgccattcgctttgccgaaaccgttgtcatcgtcttcgatgccaccattccctttgaa
aagcaggatatccagattgtcgatctggtgctgcgcgaaggccgtgccgcggttctcgcc
ttcaacaaatgggatctggtggaagatccgcaggcggtgcttgctgagctgcgtgaaaag
accgaacggctgctgccgcaggcacgtggcatccgcgccgtgccgatggctggccagact
ggctacggccttgaaaagctgatgcagtcgatcatcgacaccgacatggtgtggaacaag
cggatctcgaccgccaagctcaatcgttggctggacagtgtgcagacccagcatccgcca
ccggcggtttccggtcgccggttgaagctgaaatacatgacccaggtcaaggcccgcccg
cccgccttcatgatttcctgcaccagacccgattccgtgccggaaagctatatccgctat
ctcaccaacggcttgcgcgctgatttcaacatgcccggcgtgccgatccgcatccatctg
aaggcgtcggaaaacccgtttgagaataagcggaaacggcgctga
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