Agrobacterium vitis VAR03-1: RvVAR031_27050
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Entry
RvVAR031_27050 CDS
T08810
Name
(GenBank) chemotaxis protein CheY
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
PAS_8
PAS_4
PAS
HisKA
PAS_9
HATPase_c
Response_reg
PAS_3
Amidohydro_3
Motif
Other DBs
NCBI-ProteinID:
BCH55095
LinkDB
All DBs
Position
1:complement(2953827..2957612)
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AA seq
1261 aa
AA seq
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MLTIACEKIARLDVPAFIKDSELRFVAVNPAFVAFFGADLEDLLGHRAGELTDRPEDLAW
EDVERRALVFAEEHLALCFDHSGRQHCRVQIERFITEDEMPYVFGVFRERPGRVKSRGWK
KEPPPSGTQMPSAMAEISREVASQGGSAGVDNGAPGACLPADYAMLLDLIPLGVLLLDSQ
LDIVYFNTSFSRMFGETTVELKTGMNFQAVLDVIGRAGGDGSGEDLSGPFLAASIDEPEP
CQIAMPNGRVISARGNRLENGQFLLLYTDVTEAQTYEREGTLYRAALENVPEPVFLRDGD
RRLVFANAAYEQMLGGDRTRFYGLREDEMFPAEGDALRQENIEILETGCATEREQLIIMP
NGDTVPLLTSLKRIETKDGAPYIVGTLADVSLLKIGERQLREAKAHAEKLYDDIEAILRT
MPVGVIILDADQTLSFSNLMARNMVSWPEDRAMTGTSLADYLRHAHANGWPLKIGDDGDN
DTESRIAAYSLELQALTEARQIELTLADRRHIVVTISPLDDGQVMLTFSDYTEQRLRERE
IDEARARLQDVGKLLEEATQHMAQGLCVIQKDHILYRNDKLAELLNVSPDLVRTGADWRQ
LFDYCAERGDFGDNPKGFLDRMRSRLSVDTSASVVVQRRDGAWRGIEAVVSAEDRWLFVI
SDASEAKQREAELTTLAAQAEAADKAKSRFLANMSHEIRTPMSGVLGMTELLLSSNLDAR
QKTFVDVIVKSGRSLLTIINDIIDFSKIDDGSLSLRSAPFDPLAAVEDVVTLMAGRAAEK
DVDILVRGQGRLTHMLAGDAGRFRQILTNLLGEAIRATDRGHVLVDLGLRQEEPDLDITV
QGSRDPRSGDPITEASTGGRAWLVLRIEDTGHGMTPEQCLLAFTKFSQMNDGALHHRDGA
GLGFSIAGGLVDLFGGTIGVESVPGHGATVTVNLPFAMAAEKLPSLAGFHLRGARVLGFE
SNDISCGILNDQLCRWGFDGVAVNDPVLALAVLEQAESQNSPIEVVVIDCCRRSGGGLDL
VRKIRSDRRFDPLSIILLAADAPFNLDRMADGLNIQAQLTKPVGENLLRNVVIDVLRGTR
RGAASGFRAEPEAEAPLISDGEQPDLMLSGVIGQEQIDLLVLDAGEAERHFFHQALQALG
VGHACVEGESEALALWRQWQPGMMLIDLVEDRARVLDMVRQIRAEESQQPQTAPTVLIGL
AGDLSTYDKAACHKAGLDDLVLKPVSPDRLQDCIAYWLGGAAAVTQPQALAEDLGARQTA
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
ttgctcaccatagcgtgcgagaaaatcgccaggcttgatgtgcccgctttcatcaaggat
agcgagcttcgtttcgttgccgtcaatcccgcttttgtcgcatttttcggagcggatctc
gaagaccttctcggacatcgcgcaggagaactgacggaccgcccggaagatctggcctgg
gaggatgtcgagcgccgggcgctggtctttgccgaagaacatctggccctgtgcttcgat
catagcggtcgccagcattgccgggtgcagatcgagcgcttcatcaccgaagatgaaatg
ccctatgtgttcggggtgtttcgcgagcggcctggccgggtcaagagccggggctggaag
aaagagccaccgccgtcaggcacgcagatgccttctgccatggctgaaatctccagagag
gtcgcttctcaaggtgggagcgctggcgttgataatggcgcgcctggtgcctgcctgccc
gccgattatgccatgcttctcgatctcattccgcttggcgtgctgcttctcgattcgcag
ctcgatattgtctatttcaacaccagtttctccaggatgttcggagagacaacggttgag
ctgaagaccggcatgaattttcaggcggttctcgatgttatcggacgtgcgggcggcgat
gggagcggtgaggatttatccgggccattccttgctgcatcgatagacgagccagagcca
tgccagatcgccatgccgaacggacgggtgatttcggctcggggcaatcggttggaaaat
ggccagtttctgctgctgtataccgatgtcaccgaggcgcagacctatgagcgcgaaggc
actctttaccgtgcagcgctggaaaatgtgccggagccggtttttctacgtgatggcgac
cggcggctggtgtttgccaatgccgcttatgaacaaatgctgggtggcgaccgcacccgc
ttctatggcttgcgcgaagacgagatgtttccggccgaaggcgatgccctgcgccaggag
aatatcgagatcctggaaacgggctgcgcgacagagcgcgaacagctgatcatcatgccc
aacggcgacaccgtgcccttgctgaccagcctgaagcggatcgagacgaaggatggcgcg
ccttatatcgtcggaaccttggcggatgtttcgctgctgaagattggcgagcgacaattg
cgcgaagccaaggcccatgccgaaaagctctatgacgatatagaggcgatcctgcgcacc
atgccggtcggagtgatcatcctcgatgcggatcaaaccttgagtttttccaacctcatg
gcgcgcaatatggtgagctggcctgaggacagggcgatgaccggcacaagtttagcggat
tatctgcgccacgcccatgccaatggatggccactcaagatcggtgatgacggcgacaac
gatacggaaagccgaattgccgcctatagtctcgaattgcaagccttgacggaagcacgg
caaatcgaactgacgctggcggatcgccggcatatcgtggtgacgatatcgccgctggac
gatggtcaggtgatgctgactttttctgactataccgagcagcgcttgcgcgagcgcgag
atagacgaggcccgtgcccggttgcaggatgtcggcaagctgctggaagaggcgacccaa
cacatggcccaggggctctgtgttatccagaaggaccatatcctttaccgcaacgataaa
ttggcggaattattgaacgtgtcgccggacctggtgcgcacgggggcggattggcgccag
cttttcgattactgcgccgaacggggcgatttcggcgacaacccaaaagggttcctcgac
cggatgcgatcaaggctgtccgttgacacctccgccagcgtcgtggtgcagcggcgcgat
ggcgcctggcgcggcatcgaggcggttgtcagcgccgaggaccgctggctgttcgtgatc
agcgatgccagcgaggccaagcagcgtgaggctgaactgaccacgcttgcggcgcaggcc
gaggcggcggacaaggccaaatctcggttcctggccaatatgagccatgaaatccgcacg
ccgatgagcggcgtgctgggcatgacggaattgctgctgtcgtccaatctcgatgcccgg
caaaagaccttcgtcgatgtgatcgtcaaatccgggcgctcgctgctgaccattatcaat
gacatcatcgatttctcgaagatcgatgacgggagcctgtccttgcggtcggcccctttc
gatccactggcggcggtggaggatgtggtgaccttgatggccgggcgtgctgcggaaaag
gatgtggacatcctggtgcgcggtcagggcaggctgacccatatgctggcgggcgatgca
ggtcggttccgccagattctcaccaatctgttgggggaggcaatccgcgccaccgacaga
ggccatgtgctggtcgatctcgggttgcgtcaggaagagccggatctggacatcacggtt
cagggctcccgagaccccaggagcggagatcccattacggaggcgagtaccggcggacgt
gcatggttggttctgcggatcgaggataccggccatggcatgacgccggagcaatgcctg
ttggcctttaccaagttttcccagatgaatgacggagccttgcatcatcgggatggggcg
gggctcgggttttcgattgccggtgggcttgtcgatctgttcggcggcacgatcggggtg
gagagcgtacccggccatggtgcgactgtgaccgtcaatctgccgtttgcaatggcggct
gaaaaactaccgagccttgccggctttcatctgcgcggtgcccgggtcctgggttttgaa
agcaatgacattagctgcggtattctcaacgatcagctttgccgctggggcttcgatggc
gtggcggtcaacgatccggtgttggcgctggccgtgctggaacaggccgagagccagaat
agcccgattgaggttgtggtgatcgattgctgccggcgcagcggcggcggactggatctg
gtgcgcaagatccgcagtgaccggcggttcgatccgctgtcgatcatccttttggcggcg
gatgcgcccttcaatctcgacagaatggccgatgggttgaatattcaggcgcagcttacc
aagccggtgggcgaaaatctgctgcgcaatgttgtcatcgacgtgttgcgcggcacgcgg
cgcggcgctgcctccgggttcagggcggaaccggaggctgaggcgcccctgatctcggat
ggagagcaaccggatctgatgctgtcgggcgtgattgggcaagagcagatcgatctgctg
gtgctggatgccggtgaagcggagcgtcattttttccatcaggccttgcaggcgctgggg
gtcggccatgcctgcgtagagggggaaagcgaggcgcttgccctctggcgccaatggcag
ccgggcatgatgctgatcgatcttgtcgaggatcgggcgcgggtgctcgatatggtcagg
cagatccgtgccgaggaaagccaacagccacagaccgcgccgaccgtactgatcggtctt
gcgggcgatctttccacctatgacaaggcggcctgccataaagccggtctcgatgatctc
gtgctcaagcctgtcagccccgaccgccttcaggactgcattgcctattggttagggggt
gccgcagcggtgacgcagccacaggccctggcagaggacctcggggcgaggcagacggca
ctgtga
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