Agrobacterium vitis VAR03-1: RvVAR031_27180
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Entry
RvVAR031_27180 CDS
T08810
Symbol
dinB2
Name
(GenBank) DNA polymerase IV 2
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avf03400
]
RvVAR031_27180 (dinB2)
Enzymes [BR:
avf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RvVAR031_27180 (dinB2)
DNA repair and recombination proteins [BR:
avf03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
RvVAR031_27180 (dinB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
POLH-Rev1_HhH
HHH_5
A_amylase_inhib
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BCH55108
LinkDB
All DBs
Position
1:2977630..2978754
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AA seq
374 aa
AA seq
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MTSSEGPKTAMSLDRSTIVSVRKIIHVDMDAFYASVEQRDNPQLRGKPVAVGGSAARGVV
AAASYEARAFGVHSAMPSVTAKRKCPDLIFVPPRFDVYRQVSHQIREIFAEYTPLIEPLS
LDEAYLDVTENLKGMEIATEIALEIRAKIKAATGLNASAGISYNKFLAKMASDLNKPNGQ
AVITPKNGPGFVEALPVKKFHGVGPATAERMQRHGIETGLDLKSKSLHFLQTHFGKSGSY
FYGIARGIDDRQVRADRIRKSVGAEDTFVEDIDDLDPAKAELRPLAEKVWRYCEAHDIKG
KTVTVKIKYSDFSQATRSRTVAGYVSDMDMILGIAEHLLTSVFPFKHPVRLLGITLSSLN
TEESEQTPQLALEL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttcggaagggcctaagacggccatgagcctcgatcgttcgaccatcgtctct
gtgcgcaagattatccatgtcgatatggacgccttttatgcctctgttgaacagcgcgac
aatccgcagctgcgcggtaaacccgtcgctgttggcgggtcggcggcccgtggcgttgtg
gcggctgcaagttatgaggcgcgggccttcggcgtgcactcggcgatgccctccgtgacc
gccaagcgcaagtgcccggatttaatcttcgtaccaccccgcttcgacgtctaccggcag
gtctcccaccagatccgcgaaatcttcgctgaatacacgccgctgatcgagccgttgtca
ttggacgaagcctatctcgatgtcacagaaaatctgaagggcatggagatcgccaccgag
atcgcgctggaaatccgggcaaagatcaaggcagccactggtctcaacgcctcagctggc
atttcctacaacaagtttctggcaaagatggcgagcgacctgaacaagccgaatggccag
gctgtcatcacgccaaaaaacgggccaggttttgtcgaggccctccccgtcaagaaattc
catggcgtgggacccgccacggccgagcgcatgcaacgccatggcatcgaaaccgggctc
gatctgaaatcgaagtcgcttcattttctgcagacgcattttggcaaatccggatcttac
ttttatggcatcgcgcggggcatcgacgaccggcaagtcagagcagatcgcatccgcaaa
tctgtcggcgccgaggatacgtttgtcgaggacatcgatgatctcgatccggccaaggcc
gagttgcggcccctggccgaaaaagtctggcgctattgcgaggcgcacgacatcaaagga
aagacggtaaccgtcaaaataaaatattcagatttcagccaggcgacacgcagcaggacc
gtggcaggatacgtgtcagacatggacatgatcctcgggatagcggagcacctgctcact
tcagtattcccgttcaaacatccggtgcggctgcttgggatcaccctgtcatcgctgaac
accgaagaaagcgagcagacaccgcagctcgcgctcgaactctga
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