Agrobacterium vitis VAR03-1: RvVAR031_27440
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Entry
RvVAR031_27440 CDS
T08810
Name
(GenBank) hypothetical protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_27440
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_27440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_27440
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_27440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_4
PAS
PAS_3
PAS_9
PAS_8
Nup54
TMP_3
Mce4_CUP1
PAS_13
Motif
Other DBs
NCBI-ProteinID:
BCH55134
LinkDB
All DBs
Position
1:3004024..3005721
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AA seq
565 aa
AA seq
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MGMDGFLSSKTTTKILALEALKANVMVADANLNITYMNTAVVDLLKEAESDLKKELPRFS
VETLIGSNIDVFHKNPAHQRGMLAALKQRHAATIRVGARIFDLLVTPLKKGEKVHGFVVE
WADAKERLLNMDYAAQMAAISRSQAIIEFSVTGEILNANENFLKTVGYRLDEIRGKNHSM
FVSKDYAASEDYRQFWQVLREGRYQAAEFKRVTKDGRDVIIAASYNPILDIDGKVVKVVK
FATDVTARVQTVSALGDSLKRLCSGDFAFQLTDPFAADFEFLRHDLNRSVSQLGDTFKQI
AASTMVMSEGTREISQGVNDLSRRTETQASNLEETAAALEEVTANVNSSAQRAQEARSVA
AKAKANAEASANVVSQAVDAMSRIEDSSSKISNIIGVIDEIAFQTNLLALNAGVEAARAG
EAGRGFAVVAQEVRELAQRSAKAAKEIKDLIQNSTTEVASGVKLVSDTGMALTDISALIV
QVNDHIVAISTAAREQATGLGEVNSAVNSMDQTTQQNAAMVEESSAAASTLANESNKLVE
MIGQFKLSQGNATHPAQFSGMARVA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggacggatttctgagctcgaagacgacaaccaagattctggctctggaggcc
ttgaaggccaatgtcatggtggccgatgccaatctcaacatcacctatatgaatactgcc
gtcgtcgacttgctcaaggaagccgagagtgacctgaagaaggaattgccgcgcttcagc
gtcgaaaccctgattggcagcaatatcgacgtgtttcacaagaaccccgcccatcagcgt
ggaatgctggcggcgctgaagcagcgccatgccgccacgattcgggtcggtgcgcgcatt
ttcgacctgctggtcacaccgctgaagaagggcgagaaggtccatggctttgtggtggaa
tgggccgatgccaaggaacggctgctcaacatggactatgccgcccagatggcagcgatc
agccgctcgcaggcgatcatcgaattttccgtgaccggcgaaatcctcaacgccaacgag
aatttcctgaagaccgtggggtacaggctggacgagatccgtggcaagaaccacagtatg
ttcgtttcaaaggattatgctgcctctgaggattacaggcagttctggcaggtgctgcgg
gaaggcagatatcaggcggcggaattcaagcgcgtcaccaaggatggccgcgatgtcatc
atcgccgcctcctacaatcccattctcgacatagacggcaaggtggtcaaagtggtgaaa
ttcgcaaccgacgtgacagcgcgggtgcagaccgtctcggcgctgggcgacagcttgaag
cggctgtgttccggcgatttcgccttccaactcactgacccctttgccgccgatttcgaa
tttctgcgccatgacctcaaccggtctgtctcccaactcggtgatactttcaagcagatc
gccgccagcaccatggtgatgagcgaaggcacacgcgaaatcagccagggtgtcaacgac
ctgtcgcgccgcaccgaaacccaggcctccaatctggaggaaaccgccgccgccctcgag
gaagtgaccgccaatgtcaattcctctgcccagcgcgcccaggaggcgcgctcggtcgcc
gccaaggccaaggccaatgccgaagcctcggccaatgtcgtctcccaggccgtggacgcc
atgagccggatcgaggatagttcatcgaagatttccaacatcatcggcgtgatcgacgaa
atcgccttccagaccaatcttctcgcactgaacgcaggcgtcgaggcagcaagagcaggc
gaagcgggccgtggctttgccgttgtcgctcaagaagtgcgcgaactggcgcagcgttcc
gccaaggccgccaaggaaatcaaggacctgatccagaactcgaccacggaagtggcaagc
ggtgtcaaactggtcagcgacacgggaatggcgcttaccgatatcagcgcgctcatcgtc
caggtcaacgatcatatcgttgcgatttccaccgcagcacgagaacaggcaaccggactt
ggcgaagtcaacagcgccgtcaacagcatggatcagaccacccagcagaacgccgccatg
gtggaagaaagcagcgccgccgcctcgacgctggccaacgagagcaacaagctggtcgag
atgatcggccagttcaagctctcacaaggcaatgccacccatcccgcacagttctccggc
atggcccgcgtggcctga
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