Agrobacterium vitis VAR03-1: RvVAR031_27540
Help
Entry
RvVAR031_27540 CDS
T08810
Name
(GenBank) transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_27540
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RvVAR031_27540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
GP44
Motif
Other DBs
NCBI-ProteinID:
BCH55144
LinkDB
All DBs
Position
1:complement(3016419..3017060)
Genome browser
AA seq
213 aa
AA seq
DB search
MAIARASRTQRRTRIQEEKEEVILQAALDVFSMRGFRGSTIDQIAEVAGMSKPNLLYYFR
TKEAMHRLLMDRLLETWLEPLRAFDAEGDPQEEIRGYIRRKLEMARDFPRESRLFANEVL
QGAPIIEDVLKGPLKDLVDEKAEVIRSWIMAGKLVACDPYHLIFSIWSTTQHYADFDVQV
RAVLGAGTAEDDRFENAARFLEGLFLRGLQPGI
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgccagggcatcaaggacgcaaaggcgaactcggattcaggaggaaaaggag
gaggtcatcctgcaagcggcgctggacgtgttttccatgcgcggctttcgcggctcgacc
atcgaccagatcgccgaagtggcgggcatgtcgaaacccaatctgctctattatttccgc
accaaggaggcgatgcaccggctgttgatggaccggctgctggagacgtggctggagccg
ctgcgtgctttcgatgccgagggcgatccgcaggaggagatccgcggctatatccgccgc
aagctggaaatggcccgcgattttccgcgcgaaagccggctgtttgccaatgaagtgctc
cagggcgcgccaatcatcgaggatgtgctgaaagggccgttgaaagatctggtcgatgaa
aaggccgaggtgatccgcagctggatcatggcaggcaagcttgtcgcttgcgatccctat
cacctgattttttcaatctggtcgaccacccagcattacgccgatttcgacgtgcaggtg
cgtgccgtgctgggcgccgggacggcggaagacgaccggttcgagaatgccgcccggttt
ctggaagggcttttcttgcgaggtctccagccgggaatttga
DBGET
integrated database retrieval system
