Agrobacterium vitis VAR03-1: RvVAR031_28030
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Entry
RvVAR031_28030 CDS
T08810
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02010
ABC transporters
avf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAR031_28030
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_28030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_28030
Transporters [BR:
avf02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RvVAR031_28030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
RsgA_GTPase
BCA_ABC_TP_C
MMR_HSR1
AAA_16
AAA_22
AAA_25
NB-ARC
Septin
AAA_33
AAA_15
NACHT
Motif
Other DBs
NCBI-ProteinID:
BCH55193
LinkDB
All DBs
Position
1:complement(3068225..3068953)
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AA seq
242 aa
AA seq
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MTAEALLKVEAVETYYGNIRALGGVSVEVKKGEIVSLIGANGAGKSTLMMTICGSPQARA
GRVIFDGVDITKMPTHLIARQRIAQSPEGRRIFPRMTVMENLQMGAGLDNLKYFQEDVEK
IFTLFPRLKERHAQRGGTLSGGEQQMLSIGRALMARPKLLLLDEPSLGLAPLIVKGIFEA
IKKLNQEEGLTVFLVEQNAFAALKLSDRAYVMVNGLVTMSGSGRELLADPQVRAAYLEGG
RH
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaagctcttttgaaggttgaggccgtcgagacctattacggcaatatccgc
gcgcttggcggtgtcagcgtcgaggttaaaaaaggcgagatcgtcagcctgatcggcgcc
aatggcgctggcaagtcgacgctgatgatgacgatttgcggcagcccgcaggcgcgcgcc
ggccgggtgattttcgacggtgtggacattaccaaaatgcccacccacctgatcgcccgc
cagcgcatcgcgcaatcaccggaagggcggcggatttttccgcgcatgacggtgatggaa
aacctgcaaatgggtgctggtctcgacaatctcaaatatttccaggaggacgtcgagaag
atcttcacgctgtttccacgcctgaaagagcgccacgcccaacgcggcggcacgctttcc
ggcggtgagcagcagatgctgtccatcggccgggcgctgatggcgcggcccaagctgctg
ctgctggatgaaccatcgctggggctggcacccttgatcgtcaaggggattttcgaggcg
atcaagaagctcaaccaggaagaagggctgaccgtgttcctggtcgagcagaatgcgttt
gcagcgctgaaactgtccgaccgcgcctatgtcatggtcaacggattggtgacgatgagc
ggttccggtcgggaattgctggccgaccctcaggtacgtgccgcctatctcgaaggcggt
cggcattaa
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