Agrobacterium vitis VAR03-1: RvVAR031_28170
Help
Entry
RvVAR031_28170 CDS
T08810
Name
(GenBank) DNA-binding response regulator
KO
K13584
two-component system, cell cycle response regulator CtrA
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_28170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
avf02022
]
RvVAR031_28170
Two-component system [BR:
avf02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
RvVAR031_28170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
BCH55207
LinkDB
All DBs
Position
1:3081100..3081801
Genome browser
AA seq
233 aa
AA seq
DB search
MRVLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVDLGKLYDYDIILLDLNLPDMSGY
EVLRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELVARIHAIVRRSK
GHAQSIIITGELIVNLDAKTVEVGGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYG
GMDEPELKIIDVFICKLRKKLANAAGGANYIETVWGRGYVLREPDSAEYMETA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttctactcatcgaagacgacagcgccacagcgcagagcatcgaactgatgctc
aagtccgaaagttttaacgtctacaccaccgatctcggtgaggaaggcgtcgacctcggg
aaactatacgactacgacatcatcctgctggacctcaatcttcccgacatgtcgggttac
gaggttttgagaacgcttcgcctgtccaaggtcaagacacctatcctcatcctgtccggc
atggccggcatcgaggacaaggttcgcggtctcggcttcggcgctgacgactacatgaca
aagcccttccacaaggacgagcttgttgcccgcatccatgcgatcgttcgtcgttccaag
ggccatgcccagtcgatcatcatcaccggcgaactgatcgtcaatctcgacgccaagacc
gtcgaagttggtggccagcgcgttcacctgaccggcaaggaataccagatgctggagctg
ctttcgctccgcaagggtaccacgctgaccaaggaaatgttccttaaccatctctatggt
ggcatggacgagccggaactgaaaatcatcgacgtgttcatctgcaagcttcgcaagaag
ctggccaatgcagccggcggtgcaaactatatcgaaaccgtctggggccgtggctatgtg
ctgcgcgaacctgacagtgccgagtatatggaaacggcctga
DBGET
integrated database retrieval system
