Agrobacterium vitis VAR03-1: RvVAR031_28480
Help
Entry
RvVAR031_28480 CDS
T08810
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RvVAR031_28480 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avf03400
]
RvVAR031_28480 (ung)
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RvVAR031_28480 (ung)
DNA repair and recombination proteins [BR:
avf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RvVAR031_28480 (ung)
Prokaryotic type
RvVAR031_28480 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCH55238
LinkDB
All DBs
Position
1:complement(3111211..3111918)
Genome browser
AA seq
235 aa
AA seq
DB search
MAQSTLRLEDSWKAVVGEEFEKPYMQTLKQFLVEEKQQGKPIFPRGPEYFRALDLTPIDN
VRVVILGQDPYHGAGQAHGLCFSVQPGVRIPPSLVNIYKELQADLGIAPVRHGFLEHWAR
QGVLLLNSVLTVEEGRAGSHQGKGWEKFTDRVIHAVAESREHVVFILWGAYAQKKAAFVH
PARHLVLKSVHPSPLSAHNGFFGSKPFSKANAYLEAHGEVPIDWQLPADPAERQA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatcgacgcttcgcctggaagacagctggaaggccgtggtcggcgaggaattc
gaaaagccctatatgcagaccctcaagcagtttctggtcgaggaaaagcagcagggcaag
ccgattttccccaggggaccggagtatttccgggcgctggatctcacccccatcgacaac
gtgcgggtggtgatcctggggcaggacccctatcacggcgcggggcaggcgcatggcctg
tgcttttccgtgcagcccggcgtgcgcattccgccgtcgctggtcaatatctacaaggaa
ttgcaggccgatctcggcattgccccggtgcgccacggctttctggaacattgggcgcgc
cagggcgtgctgctgctcaacagcgtgttgacggtggaagagggcagggccggatcgcac
caaggcaaaggctgggaaaagttcaccgaccgggtcatccatgccgtggccgaaagccgc
gagcatgtggtcttcatcctctggggcgcctatgcgcagaaaaaggcggctttcgtccac
ccggcccggcatctggtgctgaaatccgtgcatccatcgccgctgtctgcccataacggc
tttttcggctcaaaaccgttttcaaaggccaatgcctatctggaggcgcatggagaggtc
cccatcgactggcagcttccagccgaccccgcagagcgacaggcgtaa
DBGET
integrated database retrieval system
