Agrobacterium vitis VAR03-1: RvVAR031_29200
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Entry
RvVAR031_29200 CDS
T08810
Symbol
fhuA
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_29200 (fhuA)
Transporters [BR:
avf02000
]
Other transporters
Pores ion channels [TC:
1
]
RvVAR031_29200 (fhuA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
BCH55310
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All DBs
Position
1:3178225..3180381
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AA seq
718 aa
AA seq
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MLAGIALQTLCLPGLVHAQDATTQLSTITVEGKSETATGPVDGYVAKRTSTGSKSDTPIT
QVPQSVSVIGTAEMADRGVTNKVDEALRYTSGVYTQPFGADGDTNWMYIRGFEATQTGSF
LDGLNLWSYGFGGFLVDPVVLERVEVLKGPASVLYGGSNPGGIVNMVGKRPTGEKFLTTE
VGINNYGNAFLTFDTGDTVKDSDVSYRVTGKIAGGDKAADYAHDFRGVIMPQITWAPDDG
TKLNVYAYYSYLEQTSGTNGFLPYVGTVEKASFGRIDRDAYYGEPGSDYSYSRQTMVGTD
FSHELENGWTFSQTARYSYLNKAENTPYTYGYYDPATGSNYLSEPTSSDAYLTRLGFSHH
TEVNSFAIDNHLNGEVETGALKHDVTLGVDYKFYQLDQVQASTTDTPISATDPVYGTTQP
ANSVYLNQILRQNQIGGYVQDQIHFGGGFIATLNGRYDYVYTTSNDRTASNADYDSNESA
ASGRAGLAYQFDNGLTPYVSVASFFNPQIGVTQGDPLKAEKGEQYEAGVKYEPSFFPGMI
TASVFQIDKKNWTVTDPLTFLSTQIGEVRSRGFELEGKVELNADWKALASFTYQDLEILE
HADTSLIGNSPYLVPKMLASAWLDYAIPTTVLAGKLEGFSLGGGIRYQGESWADYANTKK
VPDAVLFDAAIRYKKDDWGAALSVTNLFDKQYVSGCQGTLTCGYGEGRTVTLKISKSW
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
ttgctggccgggattgccctgcagacgctgtgcctgccgggcctcgtccatgcgcaggac
gccaccacccaattgtcgactatcaccgtcgaaggcaagagcgaaaccgcaactggcccg
gttgatggctatgtcgccaagcgcacctcgacaggctccaaatccgatacgccgatcacg
caagtgccgcaatcggtctcggtgatcggcaccgccgaaatggcggatcgcggcgtcacc
aacaaggttgatgaagcgctgcgctatacatcaggcgtctatacccagccgttcggggcc
gatggcgacaccaactggatgtatatcaggggcttcgaggccacccagaccggcagtttc
ctcgatgggttgaacctgtggagctatggcttcggcggctttctggtggaccctgtcgtg
ctggaacgggtggaagtgctgaaaggcccggcctcggttctctatggcggctccaatccg
ggcggcatcgtcaacatggtcggcaagcgtccgaccggtgagaaatttctcaccaccgaa
gttggtatcaacaattatggcaatgccttcctgaccttcgataccggggatacggtcaag
gacagcgatgtcagctaccgggtcaccggcaagatcgccggtggcgacaaggctgccgat
tacgcccatgatttccgtggcgtgatcatgccgcaaatcacttgggctcccgatgacggc
accaagctgaatgtctatgcctattattcctatctcgagcagacctccggcaccaatggc
ttcctgccctatgtcggcacggtggagaaagcctccttcggacggatcgaccgggacgcc
tattatggcgaacctggcagcgactacagctattcgcgccagaccatggtgggtacggac
ttcagtcacgagctggaaaacggctggacgttttcacaaacggcccgttactcctatctc
aacaaggccgagaacacgccctatacctatggctattacgatccggccaccggcagcaat
tatctctcggaaccgacaagcagcgatgcctacctgacgcggctcggcttcagccaccat
accgaggtaaactcctttgccatcgacaatcacctgaacggcgaggtcgagaccggcgcg
ctgaagcatgacgtaacattgggcgtcgattacaaattctaccagctcgatcaggtgcag
gccagcaccaccgatacgccgatcagcgccaccgatccggtctatggcaccacccaacct
gccaattccgtttatctcaaccagatcctgcgccagaaccagatcggcggttatgtgcag
gatcagatccatttcggtggcggctttatcgccacgctgaacggtcgttacgactatgtc
tatacgacgtccaacgaccgtaccgccagcaatgccgactatgacagcaatgagagtgcg
gccagcggtcgggcgggtctcgcctatcaattcgacaatgggttgacgccctatgtcagc
gtcgccagcttcttcaacccgcagatcggcgtgacccagggcgatccactgaaggcggaa
aaaggcgaacagtatgaagcgggtgtcaaatacgagccaagcttctttccgggcatgatc
accgcctcggtcttccagatcgacaagaagaactggaccgtgaccgatccgctgacattt
ctctccacccagatcggcgaggtgcgctcacgcggcttcgaactggaaggcaaggtggaa
ctgaatgccgattggaaggcgctggcctccttcacctatcaggatctggagattctcgaa
catgccgatacatcgctgatcggcaattcaccctatctcgtgcccaaaatgctggcatcc
gcctggctggattacgcgatcccaaccaccgttctggccggaaaactcgagggcttcagc
ctgggcggcggcattcgctatcagggtgaaagctgggccgattacgccaataccaaaaaa
gtgcctgacgccgtgctgtttgatgccgccatccgttacaagaaagacgactggggcgcg
gccctctccgtcaccaacctgttcgacaagcaatatgtctccggttgccagggcacgcta
acctgcggctatggcgaaggccgcacggtaacgctgaagatttcgaaaagctggtaa
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