Agrobacterium vitis VAR03-1: RvVAR031_29700
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Entry
RvVAR031_29700 CDS
T08810
Symbol
mclA
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_29700 (mclA)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_29700 (mclA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_29700 (mclA)
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_29700 (mclA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
Cache_3-Cache_2
sCache_3_3
HAMP
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
BCH55360
LinkDB
All DBs
Position
1:complement(3227575..3229617)
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AA seq
680 aa
AA seq
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MKFLSRFGLVGTITVVTTLILVVSLGAVAWTISGQVHERVTQQAIDSQNSSLRVAATLLE
RDVPGVKVSWGRDGNVERISAQTLPGQFANHDTIDSIGRMTGQTATLFTLDEATKGYIRR
TTNIIKPDGQRAVGTPLDPTGAVYSALIKGETYRGQAAILGTEYYTIYKPIINSSGSVIG
ILYAGVRVAEIAGISNQMAQAVAITAGIALLVSLLLMIVITRKTMRPIPELTAAASSLAD
GRTDLEVPHQGLRNEIGALARALEVFRQDALKKLQLEQDANETRARNDRERAEREAEKDA
DAANIRNCADMLAVAMNRLSAGDLTTRIDQSFIPELEPLRVDFNNSVNNLSLAFARLRNE
AMSVEASGNEMRSAAGALANRTEQQAASLEETSAALEQVTGTVRSAADRAQQAAVLAADA
QVSTEGSSQVVADAVSAMGRIEQASSEISKIINVIDEIAFQTNLLALNAGVEAARAGEAG
KGFAVVAQEVRELAQRSANAAKDIKALISKSGTEVAGGVKLVRETGDALGAISQQVSMIN
GLIAEIATSSREQSTGLQEINTSVNHMDQFTQKNAAMVEETTAVTHKLAESATTLVSLIA
EFKVPGEAASWAPNHQPAPAPRAPAAKPLAASRIKPAQPTSRPVGSPARSMMGKLASAFT
GGSSAAAASSASSGSNWEEF
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctatcccgtttcgggctggtggggacgatcactgtggtgacgaccctgata
ttggtcgtatctctgggcgcggttgcctggacgatttcgggtcaggttcacgagcgtgtg
acgcaacaggccatcgacagccagaacagcagcctgcgggtcgcggccaccttgctggag
cgcgatgtgcctggcgtcaaggtcagctggggcagggatggcaatgttgaacgcatttcg
gcgcaaacgctgccgggacaatttgccaatcatgacacgatcgattccattggccggatg
acgggccagacggcgacactgttcactctggacgaagcgaccaagggttatattcgccgc
acaaccaatattatcaagccggatggccagcgcgccgttggcacgccgctcgatccaacg
ggtgcagtctattcggccctcatcaagggtgagacctatcgcggtcaggccgccattctc
ggcacggaatactatacaatttataagccgatcatcaattcttccggttctgtcattggc
attctctatgccggtgtgcgcgttgccgaaattgccggtatcagcaatcagatggcgcag
gccgtggcaatcacggcgggtatcgccttgctggtttccctcctgctgatgatcgtcatc
acccgcaagaccatgcgcccgattccggaactgacggcggcggcctccagtcttgccgat
ggtcggaccgatctcgaagtcccgcatcagggcttgcgcaacgaaatcggcgctctagcg
cgggcactggaagttttccgccaggacgcgctcaagaagctgcaactggaacaggacgca
aacgaaacacgggcgcgcaacgaccgggaacgggccgaacgtgaagctgaaaaggatgcg
gatgccgccaatatccgcaactgtgccgacatgctggcggttgccatgaaccgcctgagc
gctggcgacctgacgactcggatcgaccagtcgtttattcctgaacttgaaccgctcagg
gtcgacttcaacaattccgttaacaatctcagcctggccttcgcccgtttgcgcaacgag
gcgatgtcggtcgaggccagtggcaatgaaatgcgcagcgccgcaggcgcgctggccaac
cgcaccgagcagcaggccgcctcgctggaagagacctcggcagcgctggaacaggtcacc
ggcacggtgcgcagcgccgccgaccgtgcgcaacaggccgcagttcttgctgccgatgcc
caggtcagcactgaaggctcctcgcaggttgtggccgatgcagtgtcggccatgggccgg
atcgaacaggcctccagcgagatttccaagatcatcaatgtgatcgatgaaatcgccttc
cagaccaatcttctcgcgctcaatgccggtgtcgaggctgcacgcgctggtgaagcgggc
aagggctttgctgttgtcgcgcaggaagtgcgcgagcttgcccagcgctccgccaatgcc
gccaaggatatcaaggcgttgatcagcaaatccggcacggaagtggctggcggcgtcaag
ctggtgcgtgaaaccggcgatgcgcttggggcgatttcccaacaggtgtcgatgatcaac
ggactgattgccgagattgccacctcgtcgcgtgaacagagcaccggcttgcaggagatc
aacacctccgtcaaccatatggaccagttcacccagaaaaacgccgccatggtggaagaa
accaccgccgtgacccataagctcgccgaaagcgccaccacattggtcagcctgattgcc
gagttcaaggtgccgggagaggccgcatcctgggcgccaaaccaccaaccagcccctgcg
ccacgggcgcctgccgcaaagcctttggccgcatcgcgcatcaaacccgcccagcccacc
tcccgcccggtcggctctccggcgcgctcgatgatgggcaagctggccagcgccttcacc
ggcggctcttcagccgctgcagcctccagcgcctccagtgggagcaattgggaagagttt
taa
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