Agrobacterium vitis VAR03-1: RvVAR031_30060
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Entry
RvVAR031_30060 CDS
T08810
Symbol
pepF
Name
(GenBank) oligoendopeptidase F
KO
K08602
oligoendopeptidase F [EC:3.4.24.-]
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avf01002
]
RvVAR031_30060 (pepF)
Peptidases and inhibitors [BR:
avf01002
]
Metallo peptidases
Family M3
RvVAR031_30060 (pepF)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M3
Peptidase_M3_N
HEAT_2
HEAT
Peptidase_M50B
Motif
Other DBs
NCBI-ProteinID:
BCH55396
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Position
1:3265593..3267452
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AA seq
619 aa
AA seq
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MPFSPVNQTRLPAAESASVSALSQGLGTLPEWQLADLYPAPSSDLFKADLAKASEMSLAF
ETKWKGRLEDAATKDADQGLGAALKEFEDLEDLLGKIGSYAGLYYYSEMTKPENGKFFGD
VQARLTELAAHLLFFTLELNRLDDAVIDAAIARDPATAHYKPWLIDLRQDKPYQLDDKLE
QLFLEKSQTGSAAFNRLFDETLASLRFEIDGEQLTLEPVLTMLQEADPAVREKAAMALSK
TFKDNIRIFVLVTNTLAKDKEISDRWRGFADIADSRHLSNRVERPVVDALAAAVRDAYPR
LSHRYYKMKAKWLGMDQMNFWDRNAPLPDSIDRIIPWDEARQTVLSAYGGFAPDMAEIAG
RFFDGGWIDAPARPGKAPGAFAHPTVPSAHPYVLVNYLGKPRDVMTLAHELGHGVHQVLA
GEQGALMCQTPLTLAETASVFGEMLTFRALLEKATDARERKAMLAQKVEDMINTVVRQIA
FYEFERKLHTARKEGELTAEKIGELWLSVQEESLGPAIKVSEGYETWWAYIPHFIHSPFY
VYAYAFGDCLVNSLYAVYQNAEQGFQQKYFDLLKAGGSKHHSELLAPFGLDATDPSFWAK
GLSMIEGLIDELEALDAKV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcagccccgttaaccagacccgccttccggcagccgaatccgcaagcgtatca
gcgctaagccaaggcctcggcacgctgcccgaatggcagctcgccgatctttatccagcc
ccctcttcggatctattcaaggccgacctcgccaaggccagtgagatgagcctggccttc
gagaccaaatggaagggacggctggaagatgccgccaccaaggatgcagatcagggattg
ggtgccgcgctgaaggaattcgaagacctcgaagacctgctcggcaagatcggctcctat
gccggactttattactatagtgagatgaccaagccggaaaacggcaagttcttcggcgac
gtgcaggccaggctgacggagcttgccgcccatctgctgtttttcacgctggagctgaac
cggctggacgatgcggtgattgatgccgccattgcccgtgatccggccaccgcccattac
aagccctggctgatcgatctgcggcaagacaagccctaccagctggatgacaagctcgaa
caattgttcctggaaaaatcccagaccggttcggcggccttcaaccggctgttcgacgag
accctggcaagtctgcgctttgagatcgacggtgaacagctgacgctggagccggttctg
accatgttgcaggaggccgatccagcggtgcgtgaaaaggcggccatggcgctgtcgaag
acctttaaggacaatatccggattttcgtgctggtcaccaatacgctcgccaaggacaag
gaaatttccgatcgctggcgcggctttgccgacattgccgatagccgccatctgtccaac
cgcgtcgagcgtccggtggtcgatgcactggccgctgccgtgcgcgatgcctatccgcgc
ctgtcgcaccgctattacaagatgaaggccaagtggctgggcatggaccagatgaatttc
tgggaccgcaacgcccccctgcccgacagcatcgaccggatcattccttgggacgaagcc
cgccagaccgtactatcggcctatggcggctttgcgcctgacatggctgagattgccgga
cgtttcttcgatggcggctggatcgatgcgccagcccgccccggcaaggcacccggcgcc
tttgcccatccgaccgtgccgtctgcccatccctatgttctggtcaattacctcggcaag
ccgcgcgacgtgatgacgctggcccatgaactgggccatggcgtgcatcaggttctcgcc
ggcgaacagggcgcgctgatgtgccagacgccgctgacgctggccgaaaccgcctcggtg
ttcggcgagatgctgaccttccgggcgcttctggaaaaggccacggatgcgcgtgagcgc
aaggccatgctggcccagaaggtcgaggacatgatcaacacggtcgtgcgccagatcgct
ttctacgaattcgagcgcaagctgcacaccgcccgcaaggagggcgagttgacggcggaa
aagattggcgaactgtggctatcggtgcaggaagagagccttggtccggccatcaaggtg
tccgagggctatgagacctggtgggcctatatcccccatttcatccattcgcccttctat
gtctatgcctatgccttcggcgattgcctggtcaattcgctctatgcggtctaccagaat
gcagaacaaggcttccagcagaagtatttcgacctcttgaaggctggcggcagcaagcat
cattccgagcttctcgcgccgttcggtctggatgccaccgacccatccttctgggccaag
ggcctgtcgatgatcgaagggctgatcgacgaactggaagcgcttgacgccaaagtctga
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