Agrobacterium vitis VAR03-1: RvVAR031_30270
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Entry
RvVAR031_30270 CDS
T08810
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
avf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_30270
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAR031_30270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avf02035
]
RvVAR031_30270
Bacterial motility proteins [BR:
avf02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAR031_30270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
GTP_EFTU_D4
Laminin_II
COG6_N
TMP_3
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
BCH55417
LinkDB
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Position
1:complement(3291776..3293551)
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AA seq
591 aa
AA seq
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MMVARSSQRLMALGYDAYQILVYDDSSPEIVRAKKDYDESVKRIITMINEAIALDPAKVD
RLAAIRTRYEAIITITSKVIDLDARKQDTEARAELRQADKLIAETADETRRWVVDGAKEL
SDKSTLISNETRNTIISTLGGLLVAFILAIFAALWIVSHGITLPIERLRLRMTSLAKGET
RAEIDGAGRGDELGQMAAAVAVFRDNALDRERLEAEAEASRGLSEKERAERDAQRAKDAA
DTKFAVEALAEGLTRLADGDVSYRITVPFVAGLDGLRSNFNSSVQKLQQALVTVRQNARG
IDAGANEIRSAADDLSHRTEQQAASVEETAAALEQITTTVKDSTRRAEEAGILVSKTRDG
AERSGDVVRKAVAAMQEIERSSGEISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGF
AVVAQEVRELAQRSANAAKDIKGLIVSSGQQVQAGVQLVAETGSSLETIVGEVQEINRHV
TAIVEAAREQSVGLQEINTAVNTMDQGTQQNAAMVEQTTAASHSLAKEAATLSDLLSRFK
LEDHGKVVAFEQTNDVSASRPAPSPARKLTEKLRGAFHGSAAVKEKDWQDF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatggtggcgcgttcaagtcagaggctgatggcactcggctatgacgcttaccaaatc
ttggtttatgacgattcaagtccggaaattgtcagggcgaaaaaggactatgatgagagc
gtcaagcgcattatcaccatgatcaatgaggcaatcgcacttgatcctgcgaaggtcgac
cggctcgcggcaattcgtacacggtatgaggcgatcatcacgataacatccaaagtgatt
gacctggatgctagaaaacaagataccgaggcccgcgccgaattaaggcaggcagataag
ctgatcgccgagacagctgatgagacccgccgatgggtggtcgatggtgcaaaagaactg
tccgataaaagtacgttgatctcgaatgagacgcgcaatacaattatttctacacttggc
ggtctgcttgtcgctttcattctggcgatttttgccgctttgtggatcgtctcccatggc
attaccctaccgatcgaacgcctgcggctgcgcatgacgtctcttgccaagggtgaaacg
cgggctgaaatcgatggtgctggacgcggcgatgaactcgggcagatggccgccgccgtt
gcggtgtttcgagacaatgcactggaccgtgagcgtctggaagctgaggccgaggccagc
cgtggattgtcggaaaaggaacgggccgagcgcgacgcgcaacgggccaaggatgcggcc
gataccaaatttgccgtggaggctctggcagagggtctgacgcgcctggctgatggggat
gtcagctatcgcattaccgtgccattcgtggctggccttgatgggttgcggtctaatttc
aacagctctgtccagaagctgcagcaagcgctggtgaccgtcaggcagaatgcgcgtggc
attgatgcaggcgccaatgaaatccgctctgccgccgacgatctttcgcatcggacggaa
cagcaggcggcttccgtggaagaaacggcagcagcgcttgagcagattaccacgacggtc
aaggattcgacccggcgtgccgaagaagctggtattctggtctccaaaacacgcgatggt
gcggaacgctccggcgatgttgtgcgcaaggcagttgccgccatgcaggagatcgaaaga
tcctctggcgaaatcagcaatatcattggtgttatcgatgagatcgcttttcagaccaat
cttctggcgctgaatgccggtgtcgaagccgcccgcgcgggggaagctggcaagggtttt
gccgtggtggcgcaagaggtgcgcgaactggcgcaacgctccgccaatgcggcaaaggac
atcaaaggcctgatcgtctcttccgggcaacaggtgcaggccggggtgcagctggtggct
gaaacaggctcttcgctcgaaaccattgtcggtgaggttcaggagatcaatcggcatgtc
accgcgattgtcgaggctgcacgcgagcaatcggtcgggcttcaggagatcaatacggca
gtcaataccatggaccagggtacccagcagaatgccgccatggtggaacagacaacggcg
gcaagccacagccttgccaaagaggctgcaacattgagcgacctgctgtcgcgcttcaag
ctggaagatcacggcaaggttgttgcgttcgagcagacgaatgacgtttccgcgtctcgt
cctgcaccgtcgcctgcccggaaattgacggaaaagcttcggggcgcctttcatggatcg
gctgcggtaaaagagaaggattggcaggatttttga
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