Agrobacterium vitis VAR03-1: RvVAR031_30510
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Entry
RvVAR031_30510 CDS
T08810
Symbol
glgA1
Name
(GenBank) glycogen synthase 1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00500
Starch and sucrose metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Module
avf_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
avf_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RvVAR031_30510 (glgA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
avf01003
]
RvVAR031_30510 (glgA1)
Enzymes [BR:
avf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
RvVAR031_30510 (glgA1)
Glycosyltransferases [BR:
avf01003
]
Polysaccharide
Storage polysaccharide
RvVAR031_30510 (glgA1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
GT4-conflict
Motif
Other DBs
NCBI-ProteinID:
BCH55441
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All DBs
Position
1:3327370..3328806
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AA seq
478 aa
AA seq
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MNILSVASEVYPLIKTGGLADVAGALPLALEPLGIKTRTLLPGYPAVLAKLGETQQLLSM
PDLLGETATVLSARHEGLDLLILDAPALFNRPGGPYVDTDGRDYGDNWKRFAALSLAGAR
IAQGALDDWRPDLVHVHDWQAALVPVYMRYDEKPEVASLITIHNIAFQGQFSTDILPALG
LPEHALWEALEYYGTLAFLKGGIATAHAISTVSPSYAEEILDPHFGMGMEGLIASRAHDL
FGIVNGIDTAVWNPDDDGLIASPYSAATLRKRIANREALTRHFGLDDDAAPIFCVISRLT
WQKGMDLLAEVADDLVVAGGKLVILGSGDPGLEEALQAAAHRHPGRIGMVMGYNEPLSHL
MQAGADAILIPSRFEPCGLTQLYGLRYGCVPVVSRTGGLNDTVIDANAAALAAKAATGIQ
FAPVTVAGLRQAVRRAIRLFDDKKLWYQIQKQGMKADVSWTASAQRYVDVYNRLLGKG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcctgtccgttgcatcggaagtctatccgctgatcaagaccggcggtctcgcc
gatgtggcgggcgccctgcccttggcgctcgaacccttgggcataaaaaccagaaccctg
ctgccgggctatccggcagtccttgccaagcttggcgagacacaacagctgttgtccatg
cctgatctcctgggcgagacagcaaccgtgctttcggcccggcatgagggcttggacctg
ctgatcctcgatgcaccagcgctcttcaaccgccccggcggcccctacgtcgatacagat
ggccgcgactacggcgacaactggaaacggtttgccgcactgtctctggcgggcgcccgc
attgctcaaggtgcgcttgatgattggcgacccgatctcgtccatgtccacgattggcag
gccgctctggtgccggtttatatgcgctacgatgagaagccggaggttgcgagcctcatc
accatccacaacatcgcctttcagggacaattttcaaccgacatccttccggctctcggc
ctgccagagcacgccctgtgggaagcgctcgaatattatggcacgctggcttttctgaaa
ggcggcattgccacggcccatgccatcagcaccgtcagcccgtcttatgccgaggaaatt
ctcgatccgcatttcggcatgggtatggaagggctgatcgccagccgcgcccatgacctg
ttcggcatcgtcaacggcatcgataccgccgtctggaaccccgatgatgacggactgatc
gcctcaccttatagcgctgctaccctgcgcaagcgcattgccaaccgtgaggccctcacc
cggcatttcggcctcgacgatgatgcggcaccgattttctgcgtgatttctcgcctcacc
tggcaaaaaggcatggatttactggccgaggtcgccgacgatctggtcgtagccggcggc
aaactggtcattctcggctccggcgatccgggcctggaagaggctttgcaggccgccgcc
caccgtcatcccggcaggatcggaatggtgatgggctataacgaaccgctgtcgcatctg
atgcaggcgggtgccgatgccatcctcattccgtcaagattcgaaccttgcggcttgacc
cagctttacggcctgcgctacggctgtgttccggtggtgagccgcaccggtggtttgaat
gacacggtcatcgacgccaatgcggcagcacttgcggcaaaggctgccaccggcatacag
ttcgccccggtcacggtggcagggttgcgacaggcggtacgccgggcgatccgcctcttc
gacgacaagaaactatggtatcagatccagaagcagggcatgaaagcagacgtatcctgg
acagcaagcgcccagcgctacgtcgatgtttataaccgcctcctcggaaaaggctga
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