Agrobacterium vitis VAR03-1: RvVAR031_30710
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Entry
RvVAR031_30710 CDS
T08810
Name
(GenBank) ABC transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_30710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_30710
Transporters [BR:
avf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RvVAR031_30710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
BCH55461
LinkDB
All DBs
Position
1:complement(3347557..3348663)
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AA seq
368 aa
AA seq
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MDRRGFLKKAGVAGAGSLGAVALAAPAIAQQAPKINWRLTSSFPKSLDTIYGGAEDIAAR
VAAATDGNFTIQVFAAGEVVPGLQAADAVGAGTVEMCHTCSYYYVGKDPTFAIGTAIPFG
LNARLTNAWFYQGNGNTLLNEFYAKHNLYGMVAGNTGAQMGGWFRREINTVDDLKGVKMR
IAGLAGKVIEKLGGVPQQIAGGDIYPALEKGTIDAAEWIGPYDDHKLGFYKVAKYYYYPA
FWEGGPAIHAFVNLAKWNELPKSYQTVLQDACAFANTNMMAKYDLKNPVAIKQIVSEGTT
LKPFSQDILDACFKASMEVYAEISAKNPDFKKVYEDQVAFKKEAYLWMQLAEYTYDTFMM
IQQRGGKL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcgtggatttttgaagaaggccggtgtcgcaggggccggctcgctcggggct
gttgctctggcggcacccgccattgcccagcaggcaccgaaaatcaattggcgtctgacc
tcgtccttccccaaatcgctggacacgatttatggcggcgcggaagacatcgcggcgcgc
gttgcggcggcaaccgatggcaatttcaccatccaggtgtttgcggcaggcgaggtggtg
ccgggcttgcaggccgccgatgctgttggcgctggcacggtggaaatgtgccatacctgc
tcctattactatgtcggcaaggacccgacttttgcgattggcaccgccattcccttcggg
ctgaatgcccggcttaccaatgcctggttctaccagggcaatggcaatacgctgctcaac
gaattctacgccaagcacaatctctacggcatggtggctggcaataccggcgcgcagatg
ggcggctggttccgccgcgaaatcaacaccgtcgatgacctcaagggcgtgaaaatgcgc
attgccggtctggcgggcaaggtcatcgaaaagctgggcggcgtgccacagcagattgcc
ggtggcgatatctatccggcgctggaaaaaggcaccattgacgccgccgaatggatcggc
ccctatgacgaccacaagctcggcttctacaaggtggccaaatattactactaccccgcc
ttctgggaaggtggcccggccatccacgccttcgtcaatctcgccaaatggaacgaactg
ccgaaatcctaccagaccgtgcttcaggacgcctgcgcctttgccaataccaatatgatg
gcgaaatacgacctgaagaaccctgtcgcgatcaagcagatcgtttcggaaggcacgacg
ctgaaacccttcagccaggacatcctcgacgcctgcttcaaagcgtccatggaagtctac
gccgaaatctccgccaagaacccggatttcaagaaagtctacgaagaccaggtcgccttc
aagaaggaagcctatctgtggatgcagctggcggaatatacctatgatacgttcatgatg
attcagcagcgcggcggcaaactgtaa
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