Agrobacterium vitis VAR03-1: RvVAR031_31040
Help
Entry
RvVAR031_31040 CDS
T08810
Symbol
xylB
Name
(GenBank) xylulokinase
KO
K00854
xylulokinase [EC:
2.7.1.17
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00040
Pentose and glucuronate interconversions
avf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RvVAR031_31040 (xylB)
Enzymes [BR:
avf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.17 xylulokinase
RvVAR031_31040 (xylB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FGGY_N
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
BCH55494
LinkDB
All DBs
Position
1:complement(3380594..3382063)
Genome browser
AA seq
489 aa
AA seq
DB search
MYLGLDLGTSGVKAMLIDADQTVIGSANGALTVSRPHSGWSEQAPADWIRATQEAIAGLK
AQFSRELAAVKGIGLSGHMHGATLIDAQGDVLRPCILWNDTRSFKQAAALDADPRFRALT
GNIVFPGFTAPKLAWVKENEPDIFAKTAKVLLPKDYLRLWLTGEYLSEMSDSAGTSWLDT
GKRAWSSELLAATDLGEQHMPGLVEGTAEAGRLRAELAADWGMAAGVIIAGGAGDNAASA
CGMGTVAEGHAFVSLGTSGVLFAANASYLPKPESAVHAFCHALPNTWHQMGVILSATDAL
NWYSGISGKPAGDLTNELGEDLKAPTGVTFLPYLSGERTPHNDAEIRGAFIGLGHESSRA
VLTQSVLEGVSFAIRDSLEALKSAGTSLSRVTAIGGGSRSRYWLASIATTLGIPVDIPAD
GDFGAAFGAARLGLIAATGADPLAVCSAPPTEATIEPVMALRDGYEDAYQHYRALYPAIK
QLGPTKLAQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcggattggatctcggcacgtcgggcgtcaaggcgatgttgatcgacgcggac
cagacggtgattggctcagccaatggcgcactgactgtctctcgcccgcattccggctgg
tcggaacaggcaccggcggattggatcagggcaacccaggaggcgattgccgggctgaaa
gcgcagttttcccgcgagcttgctgccgtcaaaggcatcggtctttccggccatatgcat
ggcgcaacattgatcgatgcgcagggtgatgtcttgcggccctgcattctgtggaacgac
acccgctcctttaaacaagccgcagcgctggatgccgatccgcgttttcgcgcgctgacc
ggcaatattgtctttcccggctttacggcgccgaaactggcctgggtgaaggagaatgag
ccggatattttcgccaaaaccgccaaggttttgctgcccaaggactatctgcggctctgg
cttacgggtgaatatctgtcggagatgtcggattcggccggtacctcctggctcgacacc
ggcaagcgcgcctggtcgagcgaactgctcgccgctactgatctcggcgagcagcacatg
cccggcctggtcgaagggacggcagaggcgggccggttgcgcgcggaactggcggcggat
tggggcatggctgccggtgtcattattgccggcggggcaggggacaatgcggcctctgct
tgcggcatggggacggttgcggaaggccatgcctttgtgtcgcttggcacatccggggtg
ttgtttgctgccaatgcctcctatctgccaaagcccgaaagcgccgtgcatgccttttgc
cacgcgcttcccaatacctggcaccagatgggcgtgatcctgtcggcgaccgacgcattg
aactggtattccggcatcagcggcaagcctgccggagacctgaccaatgagcttggcgaa
gacctcaaggccccgaccggcgtgaccttcctgccttatctctcgggtgagcgcacgccc
cataacgatgccgaaatccggggtgcgttcattggtcttggccacgaatccagccgtgct
gttctgacccaatccgtgctggaaggggtatcctttgccatccgtgacagtcttgaagcg
ctgaaatcggcgggaacgtcgctgtcgcgggtgaccgcgatcggtggcggctcgcgctcg
cgctattggctggcatcgattgccaccacgctcggcattcccgtcgatattccagccgac
ggtgactttggagctgcctttggtgcggcccgcctggggttgattgctgcaaccggtgcc
gatccgctcgccgtttgctcagccccgccgacggaagcaaccatcgagcctgtgatggct
ctgcgcgacggctacgaggacgcttatcagcactaccgcgctctatacccggccatcaag
caattgggtcccaccaagctggcccagtga
DBGET
integrated database retrieval system
