KEGG   Agrobacterium vitis VAR03-1: RvVAR031_31230
Entry
RvVAR031_31230    CDS       T08810                                 
Symbol
gltX
Name
(GenBank) glutamate--tRNA ligase
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
avf  Agrobacterium vitis VAR03-1
Pathway
avf00860  Porphyrin metabolism
avf00970  Aminoacyl-tRNA biosynthesis
avf01100  Metabolic pathways
avf01110  Biosynthesis of secondary metabolites
avf01120  Microbial metabolism in diverse environments
avf01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:avf00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    RvVAR031_31230 (gltX)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RvVAR031_31230 (gltX)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:avf01007]
    RvVAR031_31230 (gltX)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:avf03016]
    RvVAR031_31230 (gltX)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:avf02048]
    RvVAR031_31230 (gltX)
Enzymes [BR:avf01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     RvVAR031_31230 (gltX)
Amino acid related enzymes [BR:avf01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   RvVAR031_31230 (gltX)
Transfer RNA biogenesis [BR:avf03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    RvVAR031_31230 (gltX)
 Prokaryotic type
   Other AARSs
    RvVAR031_31230 (gltX)
Prokaryotic defense system [BR:avf02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    RvVAR031_31230 (gltX)
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-ProteinID: BCH55513
LinkDB
Position
1:complement(3400449..3401903)
AA seq 484 aa
MTTSGVRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTAEFEQKV
LDALKWTGLTWAEGPDVGGPYGPYRQSERKDTYRPFVDKMVAEGNAFRCFCTPARLEQMR
EAQRAAGKPPGYDGLCLHLKAEEVDARVAAGEPHVVRLKIPTEGSCDFHDGVYGDVSIPW
ESVDMQVLLKADGMPTYHMANVVDDHLMKITHVARGEEWLASVPKHILIYKYLGLEPPVF
MHLSLMRNADKSKLSKRKNPTSISYYSALGYLPEALMNFLGLFFMQIAEGEELLTMDELI
AKFDPDNLSKAGAIFDIQKLDWLNGRWLREKLTPDEFLGRVLTWASENERLTEGLKLAQS
RITKLGELPPLAGFLLANDVGLTPASFGGLKTSPAETLEIVTTVQADLEKILEWNVATIE
EELRAIADRLGKKLRVVTPPLFVAVSGSQRSLPLFDSMALLGRSVVRQRLKVAIQVLTSM
AGAA
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgaccacttccggcgtccgcgtccgtatcgctccttcacccaccggcgaaccccatgtc
ggcacagcctatattgcgctgttcaactatctcttcgccaagaaacacggcggcgaattc
attctgcgcattgaagacaccgatgcgacccgctcgacggcggaatttgagcagaaggtg
ctggatgcgctgaaatggaccggcctgacctgggccgaaggtcctgatgtcggcggtccc
tacggtccctatcgccagtccgagcgcaaggacacttaccgtcccttcgtcgacaagatg
gtggctgaaggcaatgcgttccgctgtttctgcacgcccgcccggctggagcagatgcgc
gaggcgcagcgcgccgcgggcaagccgcccggctatgacggactttgcctgcatttgaag
gcggaagaagtcgatgcccgcgttgccgcaggcgagccgcatgtcgtgcgcctgaaaatc
ccgaccgaaggctcctgcgatttccatgacggcgtttatggcgacgtgtcgatcccgtgg
gaaagcgtcgacatgcaggttttgctgaaggccgatggcatgccgacctaccacatggcc
aatgtggtcgatgaccatctgatgaagatcacccatgtggcgcggggcgaggaatggctg
gcctccgtgccgaagcatatcctgatctacaaatatctcggtcttgagccgccagtgttc
atgcatctcagcctgatgcgcaatgccgacaaatccaagctgtcgaagcgcaagaacccg
acctcgatttcttattattcggcactcggctacctgcccgaagcgctgatgaacttcctt
ggcctgttcttcatgcagatcgccgaaggcgaagagctgctgaccatggacgagctgatc
gccaagtttgaccccgacaatctctccaaggcgggcgcgatcttcgatatccagaagctc
gactggctgaacggccgctggctgcgcgaaaagctgacgcccgacgaattcttaggccgc
gttctgacctgggccagcgaaaacgagcggctgacggaaggcctgaagctcgctcaaagc
cggatcaccaagcttggcgaattgccgccgctggcaggcttcctgctggccaatgatgtc
ggcctgacgcccgcctcgttcggcggattgaagaccagcccggcggaaacgcttgagatc
gtcaccacagttcaggccgatctggaaaagatcctggaatggaacgtggcgacgattgag
gaagagctgcgggccattgccgaccggttgggcaagaagctgcgggtcgtgactccgccg
ctgttcgttgcggtttccggcagccagcggtcgttgccgctgttcgacagcatggcgctg
ttgggacgttccgtggtgcgccagcgcctcaaggtggccattcaggtcttgacctctatg
gctggcgctgcctga

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