Agrobacterium vitis VAR03-1: RvVAR031_32020
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Entry
RvVAR031_32020 CDS
T08810
Symbol
ameR
Name
(GenBank) TetR family transcriptional regulator
KO
K18905
TetR/AcrR family transcriptional regulator, repressor of the ameABC operon
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avf03000
]
RvVAR031_32020 (ameR)
Transcription factors [BR:
avf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RvVAR031_32020 (ameR)
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GFIT
Motif
Pfam:
TetR_C_27
TetR_N
TetR_C_24
TetR_C_5
UTP15_C
Motif
Other DBs
NCBI-ProteinID:
BCH55592
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All DBs
Position
1:3522698..3523204
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AA seq
168 aa
AA seq
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MADIAAELEMSPANVFKHFHSKTALVDAIATAHLEKLMAGLADLEMLSSPQMKLLQMAEQ
LLTKLLQDVCDNPHLFKMIVLTTDLELTAADLYREKICAIFETIVLEGVATGDFFVTDPR
HTASVIATALEGVIHPLSITREKPEILHIRCRDLIGLVTTALQNPLAK
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatcgcagcagagctggaaatgtctccggccaatgtattcaagcattttcat
tccaaaaccgcgctggtcgacgcgatcgcgacggcccatcttgaaaaactaatggccggg
ctcgctgacctggaaatgctttcttcaccacagatgaagttgctgcaaatggccgagcag
ctgctgaccaaactactgcaggacgtttgcgacaatccgcatctgttcaaaatgatcgtg
ctgaccaccgatctggaactcaccgccgccgatctctaccgggaaaagatttgcgcaatt
ttcgaaaccatcgtccttgaaggcgtggcgacgggcgactttttcgtaaccgatccgcgt
catactgcatccgtcattgccaccgctttggaaggggttatccatccactttcaatcacg
cgggaaaagcccgagattctccatattcgctgccgggatttgattggcctcgtgactacc
gcactgcaaaatccacttgcaaagtga
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