Agrobacterium vitis VAR03-1: RvVAR031_32050
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Entry
RvVAR031_32050 CDS
T08810
Symbol
nodT
Name
(GenBank) nodulation protein NodT
KO
K18904
outer membrane protein, multidrug efflux system
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_32050 (nodT)
Transporters [BR:
avf02000
]
Other transporters
Pores ion channels [TC:
1
]
RvVAR031_32050 (nodT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Spc7
Motif
Other DBs
NCBI-ProteinID:
BCH55595
LinkDB
All DBs
Position
1:3527903..3529354
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AA seq
483 aa
AA seq
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MVSVRLAAPFAMLLLSGCVMGPEHSPPQTALPAKFTEGGTKSAQDTTIVQWWTAFNDARL
NTLINQGVNQNLDVLQALERIEQARATVVTSSAGGLPSLTGTASQSGSQTNGGYSSQPRA
WESKGELSASWLLDLWGQYRRAKQSATASLDAAYASVDTSRLTYLSDLTTAYIDARYYQA
RIAIANEAVKSRRETLSLTKLQLEAGAASRLDVVQSEGLVNSQLADIPGFEANFYSNAYH
ISTLLGLPASTLINDLKKHAPQPVARRVVLSGIPADLIRNRPDIRKAERDLAAAVYDIGN
AQAQLLPSITLSGSISPSYVHSNTHGTSNTWSFGPSLNLPIFDGGTLRANVKNAQSVARE
KYLAWKQTVLNGVEDVESALAAYNRDARAVAANRAYVKSYKEALELSTASYKDGASSLLD
VLDAQRELTTAQASLAESIQQMANDYVTLNVAIGGGYNFNGKAQAIEATVKPADIPPALA
KAK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgtacgcttagctgcgccctttgcaatgctgcttctgtcaggttgcgtgatg
gggcccgagcacagcccgccacaaaccgcacttcctgccaaatttacagagggcgggacg
aagtctgcacaggacaccaccattgttcagtggtggacggcgttcaacgatgcgcgcctc
aacacgctgatcaaccagggcgtcaaccaaaatctcgacgttctgcaggcactggagcgg
atcgaacaggcgcgcgcaaccgtcgtcacctcgtctgctggcggcctgccaagcctgaca
ggcacagcaagccaaagcggcagccagaccaatggcggctatagttctcagcctcgggcc
tgggaatccaaaggtgaactttccgcctcctggcttctcgatctctggggtcaatatcgt
cgcgccaagcagagcgctacggcttcgctcgatgccgcctatgccagcgtcgatacgtct
cgcctgacctatctttccgatctgacgacagcctatatcgatgcccgctactatcaggcc
cgcatcgcaatcgccaacgaagccgtcaagtctcgccgtgaaaccctatctctcaccaag
ctccagcttgaggccggtgcggcttcgcgcctcgacgtcgtgcagtccgaaggtctggtc
aactcgcagctggcggatattcccggtttcgaagccaacttctatagcaatgcctatcat
atctcgacgcttcttggccttccggcctcgacgctcatcaacgatctgaagaagcatgct
cctcagcctgttgcccgtcgtgtggttctgtcgggcattccggctgacctgatccgcaac
cgtcctgacatacgcaaggcagaacgcgatctcgccgccgccgtctacgatattggcaat
gcgcaggcgcaattgctgccgtcgatcacgctcagcggctcgatttcgccgtcctatgtc
cattccaacacgcatggcacctccaacacctggtccttcggcccatcgctcaatctgccg
atcttcgatggcggcacgctgcgcgccaatgtcaagaatgcccagtcggtcgctcgtgaa
aaatacctggcctggaagcagactgtgctgaacggcgtcgaagacgttgaaagcgcgctt
gctgcctataaccgcgatgctcgcgccgttgcagccaatcgtgcctatgtaaagtcctac
aaggaagcgctcgaactttcgaccgcatcctataaggacggtgcttcgtccctgcttgat
gtcttggatgcgcagcgtgagctgaccaccgctcaggccagccttgccgagtcgatccag
caaatggccaatgactatgtgacattgaatgttgccatcggcggcggttataatttcaat
ggcaaggcccaggctattgaggccactgtcaagcctgcggatatcccgcccgcgcttgcc
aaagccaagtaa
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