Agrobacterium vitis VAR03-1: RvVAR031_32980
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Entry
RvVAR031_32980 CDS
T08810
Name
(GenBank) alpha-N-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00520
Amino sugar and nucleotide sugar metabolism
avf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RvVAR031_32980
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
RvVAR031_32980
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Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
Glyco_hydro_39
Glyco_hydro_30C
Motif
Other DBs
NCBI-ProteinID:
BCH55688
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Position
2:22265..23788
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AA seq
507 aa
AA seq
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MKATVLAHADYSIAEIDPRLYGSFIEHLGRAVYTGIYEPDHPSADENGMRRDVIDLVREL
NVPIVRYPGGNFVSAYNWEDGIGPRDQRPVRLDLAWHTSESNEVGLHEFADWCTSVGTEM
MLAVNLGSRGLDEARNFLEYANHSGGSYWSDLRISNGRPQPFDVKLWCLGNEMDGPWQIG
HKSADEYGRLAHETAKAMRTFDKSLELVVCGSSNAKMPSYPQWEATVLDHTYNEVDYISL
HMYFDNKAGDTPNYLAQNKKLDDYIVSVSGVIDFIKAKKRSSKNVYISFDEWNVWYHSNE
QDKAILQGNDGWPFAPPLLEDVYNFEDVLQVGLIINTFIRRSNVVRIACLAQLVNVIAPI
MTAPGGPAWRQTIFYPFLFASVHGRGTALDLRVKSPTYTASAVGEVDSLDIAAVHDTADG
SIAFFIVNRSETSIETTFDLQGFGTAPSIADYQVMTHADLKAVNTQERMTEVAPRPGEGL
VIDGTSLSASFPPLSYQMIRVKVQHVS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgaccgttctggcgcatgccgattatagcattgcggagattgatccacggctc
tacggctccttcatagagcatctgggtcgggcggtttacaccggtatttatgagcccgat
cacccaagcgctgatgaaaacggtatgcgccgcgatgtcatcgatctggtgcgggagttg
aatgtaccgatcgtgcgctatcccggcggcaatttcgtttcggcctataattgggaagac
ggcattggccctagggatcagcgcccggttcgcctcgatctcgcctggcatacgtccgag
agcaacgaggtcggccttcacgagtttgccgattggtgcacctccgtcggcacggagatg
atgctggccgtcaatctcggatcgcgcgggctggatgaggcgcgcaatttcctggaatat
gccaatcattcgggcggcagctattggagcgatctgcgcatcagcaatggcaggccccag
cctttcgatgtcaagctctggtgcctcggcaatgaaatggacggcccttggcagatcggc
cacaaatcggcggatgaatatggccggcttgcccatgaaaccgccaaggccatgcggacc
ttcgataaatcgctggaactggtggtctgcggttcgtccaacgcgaaaatgccgagctat
ccgcagtgggaagcgaccgttctcgaccatacctataatgaggtcgattacatttccctg
catatgtatttcgacaacaaggcgggcgatacgcccaattatcttgcccagaacaagaag
ctcgatgattatatcgtctcggtatcgggcgtgattgatttcatcaaggccaagaaacgc
tcttccaagaacgtctatatttcctttgatgaatggaatgtctggtatcattccaatgag
caggacaaggcaattctccagggcaatgacggctggcctttcgcgccgccgttgttggag
gacgtctataatttcgaggatgtgcttcaagttgggctgatcatcaacactttcatccgc
cgctccaatgtggtgcgcatcgcctgcctggcgcaattggtcaatgtgatcgcgccaatt
atgaccgcgccgggcggtccggcctggcggcagacgattttctatccgttcctgttcgcc
tcggtgcatggccgcggcacggcgctggatctccgggtaaaaagcccgacctatacggcg
tctgcggtcggtgaggtcgatagcctcgacattgccgccgtgcatgacaccgcggatggc
tcgattgctttcttcatcgtcaatcgctcagagacgtccatcgagaccacatttgatttg
caggggtttggcacggcgccatctatcgccgattatcaggtgatgacccatgccgacttg
aaggcggtcaatacgcaggagcggatgacggaggtggcgccacgtcccggcgaggggctg
gttatcgacggcacaagcctgtcggcgtcgtttccgccgctgtcctaccagatgatccgg
gtgaaggttcagcatgtctcttag
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