Agrobacterium vitis VAR03-1: RvVAR031_33120 Help Entry RvVAR031_33120    CDS       T08810                                  Symbol lsyA-1 Name (GenBank) diaminopimelate decarboxylase   KO K01586   diaminopimelate decarboxylase [EC:4.1.1.20] Organism avf  Agrobacterium vitis VAR03-1 Pathway avf00300   Lysine biosynthesis avf00470   D-Amino acid metabolism avf01100   Metabolic pathways avf01110   Biosynthesis of secondary metabolites avf01120   Microbial metabolism in diverse environments avf01230   Biosynthesis of amino acids Module avf_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine Brite KEGG Orthology (KO) [BR:avf00001]  09100 Metabolism   09105 Amino acid metabolism    00300 Lysine biosynthesis     RvVAR031_33120 (lsyA-1)   09106 Metabolism of other amino acids    00470 D-Amino acid metabolism     RvVAR031_33120 (lsyA-1) Enzymes [BR:avf01000]  4. Lyases   4.1  Carbon-carbon lyases    4.1.1  Carboxy-lyases     4.1.1.20  diaminopimelate decarboxylase      RvVAR031_33120 (lsyA-1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Orn_Arg_deC_N Orn_DAP_Arg_deC Motif Other DBs NCBI-ProteinID:  BCH55702 LinkDB All DBs Position 2:complement(38342..39592) Genome browser AA seq 416 aa AA seqDB search MTRLSNDTLTTLAQTYGTPVWVYDADTIRARIAQLSSFDVIRFAQKACSNTHILRQMREA GVVVDAVTLGEIERARRAGYGAGQSSGVADIVFTADVFDRSTLDRVVTDKIEVNAGSIDM LHQLGARSPGHRVWLRINPGFGHGHSNKTNTGGENSKHGIWFEQLQEALAAVRRYSLTLV GLHMHIGSGVDYRHLQRVCGAMVTFCCELGADIEAISAGGGLSIPYKDGEEEIDTVHYFA LWDSARKQIEEYLRHKIRLEIEPGRFLTADSGVLLAEVRATKAMGSNHFILVDAGFSDLA RPAMYGSYHGISVLPAPNNSAPRSDVLVPTVVAGPLCESGDVFTQGEFGTIEKRDLPQAQ TGDYMVFHDTGAYGASMSSNYNSRLYAPEVLIEGDNHRLIRRRQTLDDLLALETTA NT seq 1251 nt NT seq  +upstreamnt  +downstreamnt atgacacgcctttcaaacgacacactcaccacgcttgcgcaaacctatggaacgccggtc tgggtctatgacgcagacacgatccgcgcccgtatcgcgcaattgtcgtccttcgacgtc attcgctttgcccagaaagcttgctccaatacccatatcctgcggcagatgcgtgaggcc ggggtggtcgttgatgccgtgacgctgggtgaaatcgagcgggccagacgggcgggctac ggcgctggtcagtcctccggtgttgccgacatcgtctttaccgccgatgtcttcgatcgc agcacgctggatcgggtggtcactgacaaaatcgaggtcaatgcgggctccatcgacatg ctgcatcaacttggcgcccgctctccggggcatcgcgtctggctgcgcatcaatcccggc ttcggccacggccatagcaacaagaccaataccggcggcgaaaacagcaagcatggcatc tggttcgagcaattgcaggaagcgctggccgccgtgcgacgctattcgctaacgctggtc ggcctgcatatgcatatcggctccggcgtcgattaccggcatttgcaacgggtctgcggt gcgatggtgacattctgctgtgagcttggcgccgatatcgaggcgatttcggcgggcggc ggactatccatcccctataaggacggcgaggaagaaattgatacggtccattatttcgcg ctttgggacagcgcccgcaaacagatcgaggaatatctgcgccacaagatccggctcgaa atcgagccgggccggttcctgacggcggattcgggcgtcctgctggcagaggtccgcgcc accaaagccatgggcagcaatcatttcattcttgtcgatgccgggttcagcgatctggcc cgcccggcaatgtatggcagctatcacggcatttccgtcttgcccgccccgaacaatagc gcaccgcgcagcgacgtgctggtgccgacagtggtggcaggaccgctttgcgaatccggc gatgtcttcacccagggcgaattcggtacgattgaaaaacgcgacctgccgcaagcgcaa acgggcgactacatggtgtttcacgacaccggcgcctatggcgcatcgatgtcatccaac tataatagcaggctctatgcaccggaagtgctgatcgagggggataaccaccggctgatt cgcaggcgccagacgctggacgacctgctggcgcttgaaacaacggcataa

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