Agrobacterium vitis VAR03-1: RvVAR031_33140
Help
Entry
RvVAR031_33140 CDS
T08810
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_33140
Transporters [BR:
avf02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
RvVAR031_33140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
BCH55704
LinkDB
All DBs
Position
2:complement(40968..42380)
Genome browser
AA seq
470 aa
AA seq
DB search
MTSSTTKMAADLNDPRIKRLVMTVALPAVAGLTASAAHHAVNAMFIGALGPQALAGVSLV
LPLFLLVSAATEGLGIGLATLLARSLGQGDVKAASSVAVTALVAAVPMGIVLSTLIYLAL
PAFVMAVGGEGDLLASGLIYGRLIAFGVTLGMLQAICDFIAIAEGNSRFSMSVLIASFAL
NIALDPVFIFLLDFREAGAAIATMVSTVAALLAYAVYFYRKRGNVRIDLSLIRWHLLKPI
SSIGIPACATSIVTGLGFMVLLRQASQSGGETGVAAIAIAIRLIAFGQLPVFGFCLGAQS
VVSHAVGLGDDHRIKAAIRFMLMVTIPVALCYSTLLLIAAGPIARLFTESPEVAEQTAAC
LRLLFPVFPLAAFQSVLLVMLQSRGRAGLSAIMGLAPNGYMLIPLLMLLPAWLGFIGVAI
APAAAAVLTAALGIVVARREWATILPSSLPSGDGPLPGLSALHPDTRGLS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttcaacgacgaaaatggcagcggatctcaacgacccgcgcatcaaacggctg
gtgatgactgttgccctgcccgctgtagcagggctaacagccagcgccgcccatcacgcc
gtgaacgccatgttcatcggcgcattggggccgcaggcgctggcaggcgtcagcctcgtg
ctgccgctgttcctgctggtgagcgccgcaaccgaaggcctgggcatcggacttgcgacg
cttctggcgcggtcgcttggtcagggcgatgtaaaggccgcgtcctcggtggcggtgacg
gcgctggttgccgccgtgccgatgggcatcgtgctatccacgctgatttatctcgccttg
ccagccttcgtgatggcggtgggcggtgaaggcgaccttctcgcctcgggcctgatctat
ggacggctgatcgcctttggcgtaacgctcggcatgttgcaggcgatctgcgatttcatt
gccattgccgagggcaattcccgtttctcgatgagtgtgttgatcgccagtttcgcgctc
aacatcgcgctcgatccggtgttcattttcctgctcgattttcgggaagcgggcgcggcg
attgccaccatggtatcaaccgttgcagcccttctggcctatgctgtttatttctaccgc
aagcggggcaatgtcagaattgatctgagcctgatccgctggcacctgctgaaaccgatc
tccagcatcggcatcccggcctgtgccaccagcatcgtcaccggcctcggcttcatggtg
ctgttgcgccaggccagccaaagcggcggtgaaacaggcgttgccgccattgccattgcc
atccggctgatcgccttcgggcaattgccggtctttggcttctgcctcggtgcgcaaagc
gtcgtcagccatgccgtagggctgggtgacgaccatcggatcaaagccgccattcgcttc
atgctgatggtcaccattcccgttgctctctgctactccacgcttttgctgatcgcagca
ggtcccatcgcccggctgttcaccgaaagccctgaggttgccgaacaaaccgccgcctgt
cttcgtctgctgtttccggtctttccactggcagcttttcaatccgtcctgctggttatg
ctgcaatcacgcggacgggctggcctttcagccatcatggggctggcaccgaatggttac
atgctgatcccgctgcttatgcttttaccggcctggcttggctttatcggcgttgcaatt
gcgcctgccgccgctgcggtgctgaccgccgctctcggcattgtcgtcgcccgccgcgaa
tgggcgaccatacttccttccagccttccttccggcgacggcccacttcctggcctgtcc
gcactccatcccgatacaagaggtttgtcatga
DBGET
integrated database retrieval system
