Agrobacterium vitis VAR03-1: RvVAR031_33250
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Entry
RvVAR031_33250 CDS
T08810
Name
(GenBank) alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00052
Galactose metabolism
avf00561
Glycerolipid metabolism
avf00600
Sphingolipid metabolism
avf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RvVAR031_33250
09103 Lipid metabolism
00561 Glycerolipid metabolism
RvVAR031_33250
00600 Sphingolipid metabolism
RvVAR031_33250
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
RvVAR031_33250
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_31_2nd
GHL10
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
BCH55715
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All DBs
Position
2:56214..58319
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AA seq
701 aa
AA seq
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MNDIVKIGANGLVLSLLLPEIGMPEIIGFGETPVADSALSEVERSSRINGMDEAVPSAVL
LPVGGMGFFGWPAISGHRSGRDFILQFADWTVEKTGRITLLCAQDAVAGIAITLRFETFP
SGVIGISTDLKNIGIEDYILDRCMAASFPAEAGQVDVVSFTGMWGREFQIRRERLGTGLW
AQESRRGRTSHDRFPMLTIEGEGQSFGVALGWSGNHQIVIDRLDDGRRLVHLGEVFEPGE
TILAPGESYRSPVAYAGADRAAFHAFVRDDLMHWPDGAMSPRPVTLNTWEGNYFDHQMES
LKAQATSAAELGIERFVLDDGWFGKRDDDTTSLGDWDIDARKYPEGLSPLVDHVTSLGMQ
FGIWFEPEMINPVSALYELHPDWVLQVKGRPLLTSRNQLVLDLTRPEVSDYLFEKIDAVL
ANHAVSYVKWDMNRDLTHAGGRDGLAKISTQTRAVYALMDRVRAAHPQVEIESCASGGGR
IDYGALARTHRVWTSDCTDALERLEIQRGASVFVPPEVLGSHISASPNHQTERRHTLAFR
ALVAMAYHLGVELNPLELEGEERAELKSWIAIHKRLRPLLHAPGANFSKQPRDGRYVWGA
ADSKRIAVFVAQGPQMVGEQPEPLTLPDVVTRIGGRWKIAATHPAEPNFIRISEGQKRLL
AGKVTFDLSDLKLGGLPLPMLRPESAILLELEPVEGGDHHG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatattgtaaagattggcgcgaacgggctcgttttgagcctgttgctgccggaa
atcggcatgccggaaatcatcggctttggtgagacgcccgttgctgactcggctttgtcc
gaggtcgagcgctccagccgcatcaacggtatggatgaggccgtaccttcggcggtgctg
ctaccggtgggtggcatgggctttttcggctggcctgccatttcagggcatcgatccggc
cgtgatttcatcctgcaatttgccgactggacggtggaaaagaccgggcggatcacactg
ctctgcgctcaggatgctgtggcgggcatagcgatcacgttgcgtttcgagactttccct
tccggcgtgatcgggatctccacagacctcaagaatatcggcattgaggattacatcctg
gatcgctgcatggcggcgagctttccggcagaagccgggcaggttgatgtggtcagcttt
accggcatgtggggccgcgaattccagatccggcgcgagaggttgggaaccggcctttgg
gcgcaggaaagtcgccggggccgcacttcccatgaccgctttccgatgctgacaatcgaa
ggcgaggggcaaagctttggcgtggcgctgggttggagcggcaaccaccagatcgtcatc
gaccggctggacgatggtcgccgtctggtgcatctcggtgaagtgtttgagccgggcgaa
acgatccttgcgccgggcgagagttatcgcagcccggttgcctatgccggtgcggatcgg
gcggcgttccatgcctttgtccgcgatgatctcatgcattggcctgatggtgcgatgtcg
ccacgtccggtaaccttgaatacctgggagggcaattactttgaccaccagatggaatcg
ctgaaggcgcaggcgacatcggccgccgaacttggcatcgagcgttttgtgctggatgac
ggctggttcggcaagcgtgacgatgacacgaccagtctgggcgattgggacatcgacgcc
cgcaaatatcctgagggtctgtcgccgctggtcgatcacgtcaccagtcttggcatgcag
ttcggcatctggttcgagccggaaatgatcaatccggtctccgccctctatgagctgcat
cccgactgggtcttgcaggtcaagggccgccctttgctgacatcccgcaaccagctggtg
ctggacctcacacggccagaggtgagcgactatctgtttgagaaaatcgacgcggtgctg
gccaaccatgctgtctcctatgtcaaatgggacatgaaccgcgacctgactcatgcaggt
gggcgcgatgggctggcgaaaatttccacccagacccgcgccgtctacgcgctgatggac
cgggtgcgggctgcccatccgcaggtggagatcgaaagctgtgcctccggcggtggccgg
atcgattacggtgcgcttgcccgcacccatcgggtctggacttccgattgcaccgatgcg
ctggagcggttggaaatccagcgcggtgcctcggttttcgtgccaccggaagtgcttggc
agccatatttcagcctcgccaaaccaccaaacggagcgccgtcacacgctggccttccgg
gcgctggtggcaatggcctatcaccttggcgtcgagttgaacccgctggaactggaaggc
gaggaacgtgccgagctgaaatcctggattgccatccacaagcggctgcggcccctgctg
catgcgccgggtgccaatttttccaagcagccgcgtgacgggcgctatgtctggggtgcg
gcggacagcaagcgcatcgcggttttcgttgcccaaggcccgcaaatggtgggcgaacag
ccggagccgctgaccctgcctgacgtcgtaacccgcattggcggacgctggaaaattgcc
gccacgcatccggctgagccgaatttcattcgtatatccgaagggcagaagcgcctgttg
gctggcaaggtcacgtttgacctttcagatctcaaacttggtggcttgccgctgccaatg
ctgcggccggaaagcgcaatcctgctggaactggaacctgtcgagggaggagaccaccat
ggctga
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