Agrobacterium vitis VAR03-1: RvVAR031_33300
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Entry
RvVAR031_33300 CDS
T08810
Symbol
soxD
Name
(GenBank) sarcosine oxidase subunit delta
KO
K22085
methylglutamate dehydrogenase subunit B [EC:
1.5.99.5
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00680
Methane metabolism
avf01100
Metabolic pathways
avf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RvVAR031_33300 (soxD)
Enzymes [BR:
avf01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.5 methylglutamate dehydrogenase
RvVAR031_33300 (soxD)
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Motif
Pfam:
SoxD
Motif
Other DBs
NCBI-ProteinID:
BCH55720
UniProt:
A0A6S6MW33
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All DBs
Position
2:complement(65236..65508)
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AA seq
90 aa
AA seq
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MASLIPCPHCGPRPKEEYTIKGAALARPAPDAGPDVWHDYVYLRDNPRGAYEEYWHHTSG
CRRWIVVCRDTASHEISASFDASTRKGVSA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctcattccctgcccccattgtgggccaagacccaaagaagaatacaccatc
aaaggtgccgctcttgcccgccctgcgcctgatgctggcccagacgtatggcatgattac
gtctacctgcgcgacaatccacgcggagcctatgaagaatattggcaccacacatccggt
tgccgccgctggattgtggtgtgccgcgacaccgccagccacgaaatttccgcaagcttt
gatgcctcaacacgcaaaggggtcagcgcatga
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