KEGG   Agrobacterium vitis VAR03-1: RvVAR031_33300
Entry
RvVAR031_33300    CDS       T08810                                 
Symbol
soxD
Name
(GenBank) sarcosine oxidase subunit delta
  KO
K22085  methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
Organism
avf  Agrobacterium vitis VAR03-1
Pathway
avf00680  Methane metabolism
avf01100  Metabolic pathways
avf01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:avf00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    RvVAR031_33300 (soxD)
Enzymes [BR:avf01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.99  With unknown physiological acceptors
    1.5.99.5  methylglutamate dehydrogenase
     RvVAR031_33300 (soxD)
SSDB
Motif
Pfam: SoxD
Other DBs
NCBI-ProteinID: BCH55720
UniProt: A0A6S6MW33
LinkDB
Position
2:complement(65236..65508)
AA seq 90 aa
MASLIPCPHCGPRPKEEYTIKGAALARPAPDAGPDVWHDYVYLRDNPRGAYEEYWHHTSG
CRRWIVVCRDTASHEISASFDASTRKGVSA
NT seq 273 nt   +upstreamnt  +downstreamnt
atggcgagcctcattccctgcccccattgtgggccaagacccaaagaagaatacaccatc
aaaggtgccgctcttgcccgccctgcgcctgatgctggcccagacgtatggcatgattac
gtctacctgcgcgacaatccacgcggagcctatgaagaatattggcaccacacatccggt
tgccgccgctggattgtggtgtgccgcgacaccgccagccacgaaatttccgcaagcttt
gatgcctcaacacgcaaaggggtcagcgcatga

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