Agrobacterium vitis VAR03-1: RvVAR031_33370
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Entry
RvVAR031_33370 CDS
T08810
Name
(GenBank) type III glutamate--ammonia ligase
KO
K01915
glutamine synthetase [EC:
6.3.1.2
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00220
Arginine biosynthesis
avf00250
Alanine, aspartate and glutamate metabolism
avf00630
Glyoxylate and dicarboxylate metabolism
avf00910
Nitrogen metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01120
Microbial metabolism in diverse environments
avf01230
Biosynthesis of amino acids
avf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RvVAR031_33370
09102 Energy metabolism
00910 Nitrogen metabolism
RvVAR031_33370
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RvVAR031_33370
00220 Arginine biosynthesis
RvVAR031_33370
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAR031_33370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avf04147
]
RvVAR031_33370
Enzymes [BR:
avf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.2 glutamine synthetase
RvVAR031_33370
Exosome [BR:
avf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RvVAR031_33370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gln-synt_C
Gln-synt_N
Motif
Other DBs
NCBI-ProteinID:
BCH55727
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Position
2:71878..73185
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AA seq
435 aa
AA seq
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MTQDLAQFAAERGIKYFMISYTDLFGAQRAKLVPAQAIADMQKDGAGFAGFATWLDLTPA
HPDLFAVPDASSVIQLPWKKDVAWVAADCVMDDKPVEQAPRVMLKKLVEEAASMGLRVKT
GVEPEFFLISADGKTISDEFDTAEKPCYDQQALMRRYDVIAEICDHMLELGWKPYQNDHE
DANGQFEMNWEYDDALKTADKHSFFKFMVKSVAEKHGLRATFMPKPFKGLTGNGCHAHIS
VWDNDGKVNAFADKAMPFGLSAKGKTFLGGIMKHASALAAVTNPTVNSYKRINAPRTVSG
ATWAPNTVTWTGNNRTHMVRVPGPGRFELRLPDGAVNPYLLQAIIIAAGLSGLKTNADPG
PHYDIDMYREGHTVTDAPKLPLNLLDALRAYEADTELQQALGTEFSSAYLKLKHGEWTSY
CSQFTPWEHQTTLDI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgacacaggaccttgcacaattcgcagccgaacgcggcatcaaatatttcatgatcagc
tataccgacctttttggtgcgcaacgtgccaagctggtgccagcccaagccattgccgat
atgcaaaaggacggcgcaggctttgcaggctttgccacatggctggacctcacccccgcc
catcccgatctgtttgctgttccagacgcctcttccgtgatccaactgccatggaaaaag
gacgtggcatgggttgccgccgattgcgtgatggacgacaagccggtggagcaggcaccg
cgcgtgatgctgaaaaaactggttgaagaggccgcctctatgggccttcgggtcaagact
ggtgttgagcctgaattcttcctgatctctgccgacggcaagacgatttccgatgaattc
gacactgccgaaaagccctgctacgaccaacaagccttgatgcgccgttatgatgtgatt
gccgaaatctgcgatcacatgctggaactgggctggaagccctatcagaacgaccatgaa
gacgccaacggccagtttgaaatgaactgggaatatgatgacgcgctgaaaaccgcagac
aagcattccttcttcaaattcatggtcaaatcggtagctgaaaagcatggtctgcgtgcc
accttcatgccaaagccgttcaagggcctcacaggcaatggctgccacgcccatatctcg
gtgtgggataacgacggcaaggtcaatgcttttgccgataaggccatgccgtttggcctg
tctgccaagggtaaaaccttcctcggcggcattatgaaacatgcatcagccttggctgct
gtgaccaaccctactgtcaattcctacaagcgcatcaatgcgccacgcacggtctccggt
gccacatgggctcccaacaccgtgacatggaccggcaataaccgcacccatatggtgcgc
gtgccgggtccgggccggtttgaactgcgcctgcccgatggtgcggtgaacccttatctg
ttgcaggccattatcatcgccgcaggtctgtctggcctcaaaaccaatgccgatcccggc
ccgcattacgacattgatatgtaccgcgaaggccatacggtgacggacgccccgaaactg
ccgctcaaccttctggatgctttgcgcgcctatgaagccgacaccgagctgcaacaggca
ttgggaaccgagttctcctcagcctatctcaagctcaaacatggcgagtggacgagctat
tgctcacaattcaccccatgggagcatcagacaacactggatatttga
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