Agrobacterium vitis VAR03-1: RvVAR031_33540
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Entry
RvVAR031_33540 CDS
T08810
Name
(GenBank) LysR family transcriptional regulator
Organism
avf
Agrobacterium vitis VAR03-1
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
BCH55744
UniProt:
A0A6S6MW76
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Position
2:complement(93922..94875)
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AA seq
317 aa
AA seq
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MSAPLDTDQLQTFIAIVDTGSFTKAAGRVFKTQSAVSMQMRRLEERIGKQLFIKDGRGNR
LTAEGEKLLNYARRIVRLNSEAIAAFDDNRLEGTLRIGTPDDYADRYMPEIIGRFAKTHP
NVELYIVCEPSTDLAEKMARGELDIALVTHNPAARQSDVMRTEPLCWVASANHPLRDDAP
VPLAVGRRDCNWRQLACSALDADGRDYQILFTSWSSTVVAAAVLAGMAVSVLPESALRTG
MKVLGQADGFPPLPPVQIGIMKRPGMSPSLMNAITDHIAACLDNINPTAIEDDMDGETKT
YSRYYPRLRAGHMIPGW
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacctcttgatactgaccagttgcaaaccttcatcgccattgtcgacaccggc
agcttcaccaaggcggcggggcgcgtcttcaagacccaatcagccgtttccatgcagatg
cgccgtctggaagagcggatcggcaagcaattgttcatcaaggacgggcgtggcaaccgg
ctgacggccgaaggcgaaaaactgctgaactatgcccggcggatcgtccggctgaacagc
gaggcgattgccgccttcgacgacaaccggttggaaggcacgctgcggatcggcacaccg
gatgattatgccgaccgttacatgcctgaaattattggtcggtttgccaagacccatccc
aatgtcgagctttacatcgtctgcgaaccctctacggacctggccgaaaaaatggcccgg
ggtgagctggatatcgcgcttgtgacccataacccggctgctcgacagtccgatgtgatg
cgcaccgagccgctttgctgggtggcttcagccaaccaccccctgcgcgacgatgcgcct
gtgccgcttgcggttggacggcgcgattgcaattggcggcagttggcctgttcggcgctt
gatgctgacgggcgcgactatcagatcctgttcaccagctggtcatcgaccgtcgttgca
gcggcagtcttggctggcatggcggtgtcggtgctgccagaatcagcgctgcggaccggc
atgaaggtgctggggcaggcagatggctttccgccgctgccgcccgtgcagatcggcatc
atgaagcgccccggcatgtcgccttcgctgatgaacgccattaccgaccatatcgccgcc
tgtctcgacaatatcaatccaacggccatcgaagacgatatggacggagaaaccaaaacc
tattcccgctactatccgcgcctgcgggcgggacatatgatccccggctggtaa
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